Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu8g0025 | ATGCCGGAGCTTCGTAGTGGACCGCGACGACGTCGTGCTCCGGTTGGTCGTAGAAGCTCGGAACCACCGTCTTCGGGGGGGAGATACGTCAAGACTCGCGCTGCAGTTGCCAGGGAAGCGGCGGCGGCGGAGAGGCCGAGGACTCGTTTGGCGGCGAAGCAATCAGAAGAGGAGAAGCCGGTCATTGTTATATCCGATCATACGAAGAAGGAAGTTGAAGGCGGCGCGATGGCGGATGAGAGTGGTGGGCTGAGTGCAAACAAGGGTGCTGCGCCAGAAGATGATGCTAACCCAGCTCCTTTCCCTGATAGGGTTCAAGTAGGAGGGTCGCCTGTCTACAAAGTGGATAGGAAACTCGGCAAAGGAGGATTTGGACAGGTTTTTGTTGGCCGGCGAGTAACCGGTGGTAACGATCGTACCGCTGGTCCTGGTGCCACTGAGGTGGCTTTGAAATTTGAGCATAGGAACAGCAAAGGCTGTAACTATGGCCCCCCTTACGAGTGGCAAGTGTACAACACCCTTGGTGGCAGTCATGGAATACCTAAAGTACACTATAAGGGGAGGCAAGGAGAATATTACGTAATGGTTATGGACATGCTTGGTCCCAGCTTGTGGGATGTTTGGAATTCCTCAAGTCAGGCGATGTCTGCAGAAATGGTTTCCTGCATTGCAGTGGAGTCCCTGTCAATCTTGGAGAAGATGCACTCTAGAGGCTATGTGCATGGTGATGTAAAACCGGAGAACTTTTTACTAGGTCAGCCGTCTACTCCACAAGAAAAAAAACTGTATCTTGTAGACCTGGGATTAGCTACGAAGTGGAGAGACACCTCCAGTGGGCTGCATGTTGAATATGATCAACGTCCTGATATGTTTAGAGGGACTGTACGATATGCTAGTGTTCATGCTCATTTGGGAAGAACTGCTAGTAGAAGGGACGATCTTGAATCTCTTGCGTATACACTCATTTTCCTTCATAAAGGCAGGTTACCTTGGCAAGGTTATCAGGGTGATAACAAATCCTTCCTTGTTTGCAAAAAGAAGATGGGAACATCTCCTGAGATGCTATGCTGTTTCTGCCCAGCTCCTTTTAGGCAGTTCCTTGAGGTTGTAGTGAACATGAAATTTGATGAAGAACCTAACTATTCTAAGTTAATTTCTTTGTTTGATGGTATGCTTGGACCAAATCCTGCATTGAGGCCAATTAACACTGAAGGTGCTCAAAAGGTTGGGCAGAAGAGGGGTAGATTGAATATTGAGGAAGAAGATGATTCACAGCCAAAAAAGAAGGTCCGTTTGGGGGTTCCTGCTACACAATGGATTTCGGTTTACAATGCAAGACAGCCAATGAAGCAAAGGTATCATTACAATGTAGCGGATGCAAGATTAGCACAACATGTGGAGAGAGGGATTGCGGATGGCCTCCTTATTAGTTGTGTGGCTTCTTGTTCCAATCTCTGGGCTCTTATTATGGATGCTGGAACTGGTTTTTCCAGTCAAGTTTATAAGTTGTCACCGTTTTTCTTACATAAGGAATGGATCATGGAGCAGTGGGAAAAAAACTTTTACATTACTTCTATTGCAGGAGCTAATAATGGGAGCTCTCTTGTTGTGATGTCAAAAGGCACACACTATACACAACAATCATACAAAGTAAGTGATTCATTCCCATTCAAATGGATAAACAAAAAGTGGAGAGAAGGTTTTCATGTGACCTCAATGGCCACTGCTGGAAGTCGCTGGGGTGTTGTTATGTCTCGAAATTCTGGATACACTGATCAGGTTATTGAACTTGATTTTCTCTATCCTAGTGAGGGAATCCACAGAAGATGGGATAATGGTTATAGGATTACAGCAACTGCTGCTACATGGGATCAATCTGCTCTGATACTGAGCATTCCTAGGCGCAGGCCAGGTGATGAAACCCAGGAAACTCTGCGCACATCCCAATTTCCAAGCACACATGTTAAGGAAAAATGGTCAAAAAACCTTTACCTTGCTTGTTTGTGCTATGGACGCACAGTATGCTGA | 2028 | 0.4625 | MPELRSGPRRRRAPVGRRSSEPPSSGGRYVKTRAAVAREAAAAERPRTRLAAKQSEEEKPVIVISDHTKKEVEGGAMADESGGLSANKGAAPEDDANPAPFPDRVQVGGSPVYKVDRKLGKGGFGQVFVGRRVTGGNDRTAGPGATEVALKFEHRNSKGCNYGPPYEWQVYNTLGGSHGIPKVHYKGRQGEYYVMVMDMLGPSLWDVWNSSSQAMSAEMVSCIAVESLSILEKMHSRGYVHGDVKPENFLLGQPSTPQEKKLYLVDLGLATKWRDTSSGLHVEYDQRPDMFRGTVRYASVHAHLGRTASRRDDLESLAYTLIFLHKGRLPWQGYQGDNKSFLVCKKKMGTSPEMLCCFCPAPFRQFLEVVVNMKFDEEPNYSKLISLFDGMLGPNPALRPINTEGAQKVGQKRGRLNIEEEDDSQPKKKVRLGVPATQWISVYNARQPMKQRYHYNVADARLAQHVERGIADGLLISCVASCSNLWALIMDAGTGFSSQVYKLSPFFLHKEWIMEQWEKNFYITSIAGANNGSSLVVMSKGTHYTQQSYKVSDSFPFKWINKKWREGFHVTSMATAGSRWGVVMSRNSGYTDQVIELDFLYPSEGIHRRWDNGYRITATAATWDQSALILSIPRRRPGDETQETLRTSQFPSTHVKEKWSKNLYLACLCYGRTVC* | 676 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu8g0025 | 675 | CDD | STKc_CK1 | 113 | 388 | - | - | |
Pvu8g0025 | 675 | PANTHER | CASEIN KINASE-RELATED | 71 | 646 | - | - | |
Pvu8g0025 | 675 | ProSiteProfiles | Protein kinase domain profile. | 113 | 398 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pvu8g0025 | 675 | MobiDBLite | consensus disorder prediction | 38 | 76 | - | - | |
Pvu8g0025 | 675 | Gene3D | Transferase(Phosphotransferase) domain 1 | 86 | 434 | - | - | |
Pvu8g0025 | 675 | Pfam | Protein kinase domain | 113 | 403 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pvu8g0025 | 675 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 239 | 251 | IPR008271 | GO:0004672|GO:0006468 | |
Pvu8g0025 | 675 | MobiDBLite | consensus disorder prediction | 1 | 17 | - | - | |
Pvu8g0025 | 675 | MobiDBLite | consensus disorder prediction | 1 | 108 | - | - | |
Pvu8g0025 | 675 | SUPERFAMILY | Protein kinase-like (PK-like) | 113 | 396 | IPR011009 | - | |
Pvu8g0025 | 675 | SMART | serkin_6 | 113 | 407 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Pvu8g0025 | 675 | ProSitePatterns | Protein kinases ATP-binding region signature. | 119 | 151 | IPR017441 | GO:0005524 | |
Pvu8g0025 | 675 | PANTHER | SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED | 71 | 646 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu8g0025 | Pvu-Chr8 | 310080 | 319986 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu8g0025 | 113 | 270 | EF-hand Containing Proteins | AT4G36070 | 28.313 | 3.72e-07 | 51.6 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CK1_CK1-Pl | Pvu8g0025 | Pkinase | 1.3e-17 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu8g0025 | - | - | gmx:100819969 | 1268.83 |