Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0022 ATGGCTTCATCTTTGGAGGAGCTTCTTGCAGAGGAGGGGTTCAAAGGAATCAGAAGAGTGCAAAGGTCTAGATCTTCCTTCCACTATGGTTCTTCAAGCGAACCTCTTTACTCTCTGGAAGGCAGATTTAGTGTATCAAGTGAAAGAATTCGACCGCAGAGACAAAAGTCTGATGCCTCACTATATCAGATCACAAGTGGACTTTTGAAAACCGACCCTCATACTGCAAAGAACAGGAGATCCAGGGATAATATTATTTTGAGAGAAGAAGTGGATGAAAGGTTGAAGATTGAAGCCGTGAAGAACTCTTCAAGCCATGCTGATTCAGGTGAAGAAGTTCATACCAAATCGTCAGAACACATGCCAAGGGATGAAATTGCTGAGTTGAATGAACAAGAAGCTAGCAGATTTGAAGATACTTATTCAAACGAAGTGGCTGCAAAAGGAGGCAAAGAAAAGAATCTCCATGAACTTGTGGAAGAAAAAATATGGAGGGAAAAGCCTGCAAAGGTGCAAAGCAGAAGTTCCAGTATAAATATGCGTAGATACTCTAACAGCAAGAGCTTTGAATACACCAGCAGGAAGAAAAATAGCAATCTTGAAGTGCAAGTAGCTTCTGGTCTTGCTCTTGATGAAGTAGCAATCCAAGCCGTAGTTTCCATTCTAAATGGATATATAAAGTGTTTTCCAAAAGATGAGGAGTTTCGGTCTACATTGCATCACAGATGTTTCTCCTCCTTGAATTTTCTTGAACTGAAAGAAGAGAAAATTTCTCAGAGCAAAGTCATAAGAAGTCTTGAGCAAGCAATTGAGGCCATTGAACAATTCGTGGGGGAACCTGCATCTGCCATGTATCTGAAAAGAACAACGATGCAGCTTAGTATTATTACAGGTTTGAGTTTAAATGATTTGAAATACGAACATACGTGTCGGATACCGAATTATAAGTTGTCAGCTTGTGCTCATCTTTACCTCAGTGTGGTATACATGATGCAGAAAAAGAATAAGGTGTCAGCAAAGCATCTCTTGCAAGTGTTTTGTGATTCACCTTTTCAGGCACGGACTATGTTGTTGCCTGAACTGTGGGAGCATCTATTTTCTCCACAATTTTCTCATTTGAAAGCATGGTATGAGAAGGAAGAAGAAGTTCTAGTAGACACACCAAACAAAACAAGAAGGCTAAAGCTTCTTCAAGAAGTGTATAATGAGCATTTGGATTCTGTAACTCATATATTTGCTGTATATTACAAAGATTGGCTCACTGAAGGAGTGGAATCTCCAACAATTCCTTCAATTGGCATTCCATCAGTTTCTGTCACAGGAAGTCAAGAGGGAAGTTCACTTGGTCATTCTTTTGAGTCTGCTAGCTCCATTGATCCATTCTCACCACAGCCAATGGTGAGCAAGAAACTGTATGATTCTATGTTTGGTAGCTTTGGTAGACCTGGAGTTTACCAAGTCAAAGATGTTAAGGATGATGGTAACCAAGACAACTGTGTGAAAGGCTCTCATGGTTCAACATTTGTTAAACAGACCTTAACATATGAGTCTGAAACTGTCAAGTTTACAGATCAAGATATTGAGGGTTTCTCTCAAGGTGTAGCTATTGATACAATCAAACCACACAAAGGAAATTTAGTGGCAGCTGCAGAAGAATGGCAGAAAAGGAATGTCACTGATGACATTAATAACTCTTTCTCTATGCAAACTAATTTAAACAATCACATTGTTGATGCCCTGCCATATGAAAAAGCAAATGATCTTAAAAAGCCAAATAAGACAAGTTATGCTCTTCAAGGATCAGATTTTCCAAGCATTCCACAGGAATTTATTTGTTCTCTTACTGGGAATCTCTTTGAGGAACCAGTCACCCTAGAGACAGGTCAAACCTTTGAAAGAAAGGCCATCAAAGCATGGTTTGAAAAGGGAAACAGAACTTGCCCTGTAACAGGAAATGCTTTGGAATGCTTGGCCATGCCATTTACCAACCTTATTTTGAAGCGTTTGATTGATAATTGGAGGTCAGAACGTTTTGATTACCTTCTTGATCTTGCTTCCCAAAGAGGGGAGAATTCAGAGGAGCTTAGGTTGAAAAAAGGGGATGAGGCTGCTGTTTTCAAGTTAGAGAGCCTTTTCTCCTCTTTGAAAGAAGAGGAGAAATCAACTTATGTTAAGCATCTCATCTCTTTAGGAGTTCTTCCATTTCTTTTTAGGAGGTTTGAACAGGGAAATGTGGAAGAAAAATCACTAGTGGTGTCACTCTTGCTAAATTGTATTCAAGTAGACTCTGGTTGCCTATATACTATAGCAAGAAGTGTTAACAGAAAATGTCTTCTTGAGCTTCTTAGTAGCAAGGAGGCTACCCCAACAACAAATGCAATACTATTCCTTACTGAACTTTTATCAATGAAGAGGAGAAAGGATGTTACTTCATTCATAAGTGGCTTGGCGGGTGAAAAAGTATTTAATATAATGCACATTCTACTCCTGTATCTCAAGAATTCTTCTCCATTTGAAAAGCCTCTAATTGCTGTCCTTTTGTTACACTTTGATCTGCTGGTTGAGCCGCAAAAGTTTAGTGCATACAGAGAGGTGGCTGTGAATGCCATTGCAGAGGCACTTGATGGCAGCTTAAACAATGAGAAGGCCCGAGAAAAGTGTTGCAGAGCACTTTTAATCTTGTGTGGCCATTTTTCTTCTACTGGAAAGATACCAACCAAGACTAGCATCTTAAAACAAGCAGGTTATAATCATGAGAGCGTAGAAGTGAAGCCTCATGGCCATCAAAAAGAGGGTCAACAGTCAGAAGTAACCATTTCATTGGAAGATGAAGACAAAAGGGTTGAAGAGTTGCTAAAGAAGCTGATAGAGTCGTTGATTGGTGATGGAGAAGGCCCATTTTTGAAGAGCTTATCCAGATGTTTGGATTGTAAGCACCTAGATTTGGTGAGGGCGTGTCTAATAACTGTGACATGGTTGAGCTCTTCGCTATCTACACTATTTGGTGCTGGATTGCCTCTTCCCACCTTCTCATCCATCATCTCTCAGTTGAAAGGAATCTTGGAAGATGGAGAACTTGAGCTCAAGGCTCTGGCTTCTTTGTCTTTGCTAAATTTCAGTAAAATATCAGAATGCAAAACCCTTATGAAGACTATGGCAGAAGATGTTGCCCCCCTTCTTCATGGACTTGCTGAGGTAACATGGACTGCAAAACAGCTGCATGCTGCTGTTTCTGGAGAGAATTTGTAG 3249 0.3998 MASSLEELLAEEGFKGIRRVQRSRSSFHYGSSSEPLYSLEGRFSVSSERIRPQRQKSDASLYQITSGLLKTDPHTAKNRRSRDNIILREEVDERLKIEAVKNSSSHADSGEEVHTKSSEHMPRDEIAELNEQEASRFEDTYSNEVAAKGGKEKNLHELVEEKIWREKPAKVQSRSSSINMRRYSNSKSFEYTSRKKNSNLEVQVASGLALDEVAIQAVVSILNGYIKCFPKDEEFRSTLHHRCFSSLNFLELKEEKISQSKVIRSLEQAIEAIEQFVGEPASAMYLKRTTMQLSIITGLSLNDLKYEHTCRIPNYKLSACAHLYLSVVYMMQKKNKVSAKHLLQVFCDSPFQARTMLLPELWEHLFSPQFSHLKAWYEKEEEVLVDTPNKTRRLKLLQEVYNEHLDSVTHIFAVYYKDWLTEGVESPTIPSIGIPSVSVTGSQEGSSLGHSFESASSIDPFSPQPMVSKKLYDSMFGSFGRPGVYQVKDVKDDGNQDNCVKGSHGSTFVKQTLTYESETVKFTDQDIEGFSQGVAIDTIKPHKGNLVAAAEEWQKRNVTDDINNSFSMQTNLNNHIVDALPYEKANDLKKPNKTSYALQGSDFPSIPQEFICSLTGNLFEEPVTLETGQTFERKAIKAWFEKGNRTCPVTGNALECLAMPFTNLILKRLIDNWRSERFDYLLDLASQRGENSEELRLKKGDEAAVFKLESLFSSLKEEEKSTYVKHLISLGVLPFLFRRFEQGNVEEKSLVVSLLLNCIQVDSGCLYTIARSVNRKCLLELLSSKEATPTTNAILFLTELLSMKRRKDVTSFISGLAGEKVFNIMHILLLYLKNSSPFEKPLIAVLLLHFDLLVEPQKFSAYREVAVNAIAEALDGSLNNEKAREKCCRALLILCGHFSSTGKIPTKTSILKQAGYNHESVEVKPHGHQKEGQQSEVTISLEDEDKRVEELLKKLIESLIGDGEGPFLKSLSRCLDCKHLDLVRACLITVTWLSSSLSTLFGAGLPLPTFSSIISQLKGILEDGELELKALASLSLLNFSKISECKTLMKTMAEDVAPLLHGLAEVTWTAKQLHAAVSGENL* 1083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0022 1082 SUPERFAMILY RING/U-box 602 676 - -
Pvu8g0022 1082 SUPERFAMILY ARM repeat 711 1048 IPR016024 -
Pvu8g0022 1082 ProSiteProfiles U-box domain profile. 605 680 IPR003613 GO:0004842|GO:0016567
Pvu8g0022 1082 PANTHER OS04G0584500 PROTEIN 1 1080 - -
Pvu8g0022 1082 Pfam U-box domain 606 676 IPR003613 GO:0004842|GO:0016567
Pvu8g0022 1082 Gene3D - 680 1076 IPR011989 -
Pvu8g0022 1082 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 605 679 IPR013083 -
Pvu8g0022 1082 MobiDBLite consensus disorder prediction 98 123 - -
Pvu8g0022 1082 CDD RING-Ubox_PUB 610 651 IPR045210 -
Pvu8g0022 1082 PANTHER OS04G0584500 PROTEIN 1 1080 - -
Pvu8g0022 1082 SMART Ubox_2 609 673 IPR003613 GO:0004842|GO:0016567
Pvu8g0022 1082 ProSiteProfiles ACT domain profile. 892 970 IPR002912 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0022 Pvu-Chr8 265290 272554 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0022 599 796 U-box Gene Family AT1G71020 29.167 3.10e-14 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0022 - - vra:106758533 1658.27