Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0019 ATGTCCTCTGCTTTCAACACACCCAGATTCGTCCTCAACAAGGTTCTGGCCAAATCTCAGCACGAAGGGGACGGAGCTGTTGTCAGAAGAGGCATTGGAAGGAGCGAGTTGAAGAACTTGGATCCCTTCCTAATGTTGGATCACTTCTCAGTATCTCCCCCCGCAGGATTTCCCGATCATCCACACAGAGGTTTTGAAACTGTCACCTACATGTTAGAGGGAGGTATTACTCACCAAGATTTTGCTGGGCACAAGGGTACAATCAGAGCTGGTGATGTTCAGTGGATGACTGCAGGTAGGGGAATAATTCACTCAGAAATGCCCGCAGAAGCAAACAACAAGGGACTGCAATTATGGATCAATTTATCATCCAGGGACAAAATGATTGAACCCAAGTACCAAGAGCTTCCGAGGGAGAACATTCCAACAGCAGAAAAAGATGGGGTTGAAGTGAGAGTGATAGCAGGAGAAGCAATGGGAGTGCAGTCCCCCGTGTACACACGAACTCCAACCATGTTCCTTGTGTTCTCCATGATGCCAGGAAGTGAGTGGCATCAGAGCATTCCAGAGTCGTGGAATTGCTTTGTTTATGTGATTGAAGGAGAAGGGGTTTTCGGGTCTCCAAGTTCTTCTCCATCTATGGCACACCATGTGCTTGTTCTGAGTCTTGGTGATGGCCTTAGCGTGTGGAACAACTCTTCAAAGCCTATTAGGTTCGTTGTGGTTGGAGGAGAGCCACTGAACGAGCCAGTGGCTCAGTATGGGCCTTTTGTGATGAACACACAGTCTGAGATTGAGAAAACCATTGAAGATTACCAACAAGGGAGGAATGGGTTTGAGATGAGGAACTATTGGAGGTCTCAATAG 867 0.4752 MSSAFNTPRFVLNKVLAKSQHEGDGAVVRRGIGRSELKNLDPFLMLDHFSVSPPAGFPDHPHRGFETVTYMLEGGITHQDFAGHKGTIRAGDVQWMTAGRGIIHSEMPAEANNKGLQLWINLSSRDKMIEPKYQELPRENIPTAEKDGVEVRVIAGEAMGVQSPVYTRTPTMFLVFSMMPGSEWHQSIPESWNCFVYVIEGEGVFGSPSSSPSMAHHVLVLSLGDGLSVWNNSSKPIRFVVVGGEPLNEPVAQYGPFVMNTQSEIEKTIEDYQQGRNGFEMRNYWRSQ* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0019 288 PIRSF Pirin 7 286 IPR012093 -
Pvu8g0019 288 Pfam Pirin 29 120 IPR003829 -
Pvu8g0019 288 PANTHER PIRIN-LIKE PROTEIN 3 288 - -
Pvu8g0019 288 Gene3D Jelly Rolls 22 274 IPR014710 -
Pvu8g0019 288 PANTHER PIRIN-RELATED 3 288 IPR012093 -
Pvu8g0019 288 Gene3D Jelly Rolls 142 247 IPR014710 -
Pvu8g0019 288 CDD cupin_pirin_C 170 246 - -
Pvu8g0019 288 CDD cupin_pirin_N 26 122 - -
Pvu8g0019 288 SUPERFAMILY RmlC-like cupins 9 286 IPR011051 -
Pvu8g0019 288 Pfam Pirin C-terminal cupin domain 174 278 IPR008778 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0019 Pvu-Chr8 248518 250295 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0019 6 281 Calmodulin-binding Proteins AT3G59220 64.388 3.94e-132 374