Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0010 ATGGAAAAACTGAATTTTGTGAAGAATGGGGAGCTCAGATTGCCACCGGGGTTCCGTTTCCACCCAACTGATGAGGAATTGGTTGTGCAATACTTAAAGCGGAAGGTCTTCTCCTTCCCTTTGCCAGCCTCTGTCATTCCTGAGGTTGATGTTTGCAAGTCTGATCCTTGGGATTTGCCAGGTGATTTAGAGAAAGAAAGGTACTTTTTCAGCACCAAAGAGCCCAAATATCCTAATGGCAACCGCTCCAACAGAGCCACCAATTCAGGTTATTGGAAGGCCACTGGGTTGGACAAACAAATTGTAACTTCAAAAGGGAACCAAGTTGTGGGGATGAAGAAGACACTTGTTTTCTACAGAGGAAAGCCACCTCATGGATCTAGAACTGACTGGATCATGCATGAATATCGCCTCCTTAACGCACCCACTTCCTCTCTGTCTCAGAGCCCTGTGGTTGAAGTTCCCATGGAAAACTGGGTTCTATGTCGCATATTTTTGAAGAGGAGAAGTGGTAGAAATGGGGAGGAGAAGGAGATGGGGAGTTTGAGAGGGAGAGTGGATAACCGGAAGGTGAGGAAGTTGAAGATGGTTTTCTATGACTTTTTGGCGCAGAACAAGACTTATTCCTCATCTTCTGGCGCCAGTGGTATTACCCAAGAATCAGATGAGCATGAAGAGAGTAGTAGCTCCAATACCTTCCCTTATTTTAGAAGAAAACCTTGA 723 0.4537 MEKLNFVKNGELRLPPGFRFHPTDEELVVQYLKRKVFSFPLPASVIPEVDVCKSDPWDLPGDLEKERYFFSTKEPKYPNGNRSNRATNSGYWKATGLDKQIVTSKGNQVVGMKKTLVFYRGKPPHGSRTDWIMHEYRLLNAPTSSLSQSPVVEVPMENWVLCRIFLKRRSGRNGEEKEMGSLRGRVDNRKVRKLKMVFYDFLAQNKTYSSSSGASGITQESDEHEESSSSNTFPYFRRKP* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0010 240 Gene3D NAC domain 23 171 IPR036093 GO:0003677|GO:0006355
Pvu8g0010 240 Pfam No apical meristem (NAM) protein 15 138 IPR003441 GO:0003677|GO:0006355
Pvu8g0010 240 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 239 - -
Pvu8g0010 240 PANTHER NAC DOMAIN-CONTAINING PROTEIN 83-LIKE 1 239 - -
Pvu8g0010 240 ProSiteProfiles NAC domain profile. 14 167 IPR003441 GO:0003677|GO:0006355
Pvu8g0010 240 SUPERFAMILY NAC domain 10 167 IPR036093 GO:0003677|GO:0006355
Pvu8g0010 240 MobiDBLite consensus disorder prediction 208 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0010 Pvu-Chr8 184835 192057 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0010 1 233 NAC Transcription Factor Family AT5G13180 58.527 5.25e-99 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pvu8g0010 NAM 5.8e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0010 - - var:108321729 427.172