Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu8g0002 ATGGATATTTGCATTTACAAATTCATTGTTTGGGTTTCATCTATTCTGTGGTTGATACGGGTGTCTTCGGGAGACGTTCTTGATGACAACATCCTGATAGACTGTGGATCCCCCAAAAATACTGAGGTGGGGGCACGATTATTTCAAGCAGATAACTCCTCTGCTCACTTACTTTCAACTTCAGAGCTTATTTTGGCTAAGGCAAACTCCACCCATATTCCCTCATCTTTTGATTCACAACTATACCAGACTTCTCGAATCTTTAGGAGTGTTTCTCAATACACATTCCCAATCAAAAAACAAGGAAGGCACTGGATTCGCTTGTATTTCTCCCCTTTCAATTTTGGAACTTACAATATGAGCACTGCAAAATTCTCTGCTTCTGCTCATGGCATCACACTGCTCAATGATTTTCAAATATACAGTGGCTCTTTGCTAAAAGAATTCTCTTTAAACATAACCGAAAGCCACCTCGTGCTAACCTTTACCCCTTCTTTTGGTTCATTTGCCTTCATCAACGCCATAGAAGTTTTATCCATCCCTGACCATGTTGTTCCTGAGCGTGTTAGCATTGTGAGCCCTCATGTGGATGATAAAGATCTGTGGAATAAGGCACTGGAGACTGCTGCTAGGGTGAATATGGGTAATCAAACTGTGTCTCCTCTTAATGATACTTTGTGGCGTCTATGGGTCTCGGATGATAGATACCTTATACACAGTAATCTCGTGGATTTTGTGTCCAATGTCACAGCAGTTAATTTTACAGAAACAAACATTACTCTAGATATTGCCCCGTCCAAGGTATACGGGACCGTGACTAGATTGAGAACGGGTTCAGATCCCCGAACAAATGCTAATGTGACATGGCTTTTTAATGTTGATCCCGGCTTTGATTATCTGGTTCGCTTTCATTTTTGTGACATTGTGAGTCTACCTCCAAACACTCTCTTCAACGTTTATATTAACTCTTGGCTTGTTTCTACACTCGATCTTGGTAAACAAACATCAAATAAATTTGGTGCGCCATATTACATGGATGCCGTAACTAGGATTAGTGGCAGCCAAAGGTTAAATGTTAGTGTGGGTACTTTCAGTATAAGTGAAGCATCTTCTCCGGAGGCCATTCTGAATGGGCTGGAGATCATGAAAGTGAGCAACTATAAAGGTAGTCTGGTTCTAGATTCGGAGACAAGTACGACGAAAAGAGTTGGTATCATAGTGGGTTTGGTGACAGGATCCGTGGTTGTTTTTTCGGCTACAGTTATGGCTTTACTTATGCTTTGTAGAAGAAAAAGAAGAAGAAGAAGAAGAAAAAGAAACAATCTCCACACTGGTCATTTAAAAGTTGACCATTTTCCTGTAAGCGAAGTCGTGAATAACAATTATGTTGGTAAAGCCAATTTTCACAACCCGGAAATTGGGTATCGGATACCTCTTACACTGATTCAAGAGGCAACTAATAACTTCAGTGAAGATTTGATCATTGGTGCTGGTGGTTTCGGGAAGGTTTACAAGGGAGTTTTGAAACATGAAACAACAGTAGCTATCAAAAGGGGGTCAAGCCAATCACAACAAGGTCTTGCTGAGTTTCGGACTGAAATTGAGATGTTATCACAGTTTCGTCATCGTCACTTGGTATCATTGATTGGGTATTGTAACGAGCAAAATGAGAGGATCATTGTTTACGAGTACATGGAAAAAGGGAGCCTGAAGGAGTATATGTTCGGGTCAGATGCAGAGAGACCTTGCTTAAGTTGGAGACAGAGGCTTGAGATTTGCATAGGAGCAGCCAGAGGACTACATTATCTTCACACTGGCTCTGCCAAGGCGATAATTCACCGTGATGTCAAAACGGCAAATATCCTGCTTGATGAAAATTTCACGGCCAAAGTTGCCGATTTTGGTCTTTCAAAGACTGGTCCAGAGAGTGATAAGACACATGTCAGTACAGCAGTGAAAGGCAGCTTTGGGTATCTTGATCCAGAATACTTAATAATGCAACAGTTGACCGAAAAATCAGATGTTTACTCAGGTAATGGCCTTGCTCATGGAAAAGAGTTGTTTCCATGA 2070 0.4116 MDICIYKFIVWVSSILWLIRVSSGDVLDDNILIDCGSPKNTEVGARLFQADNSSAHLLSTSELILAKANSTHIPSSFDSQLYQTSRIFRSVSQYTFPIKKQGRHWIRLYFSPFNFGTYNMSTAKFSASAHGITLLNDFQIYSGSLLKEFSLNITESHLVLTFTPSFGSFAFINAIEVLSIPDHVVPERVSIVSPHVDDKDLWNKALETAARVNMGNQTVSPLNDTLWRLWVSDDRYLIHSNLVDFVSNVTAVNFTETNITLDIAPSKVYGTVTRLRTGSDPRTNANVTWLFNVDPGFDYLVRFHFCDIVSLPPNTLFNVYINSWLVSTLDLGKQTSNKFGAPYYMDAVTRISGSQRLNVSVGTFSISEASSPEAILNGLEIMKVSNYKGSLVLDSETSTTKRVGIIVGLVTGSVVVFSATVMALLMLCRRKRRRRRRKRNNLHTGHLKVDHFPVSEVVNNNYVGKANFHNPEIGYRIPLTLIQEATNNFSEDLIIGAGGFGKVYKGVLKHETTVAIKRGSSQSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCNEQNERIIVYEYMEKGSLKEYMFGSDAERPCLSWRQRLEICIGAARGLHYLHTGSAKAIIHRDVKTANILLDENFTAKVADFGLSKTGPESDKTHVSTAVKGSFGYLDPEYLIMQQLTEKSDVYSGNGLAHGKELFP* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu8g0002 689 ProSiteProfiles Protein kinase domain profile. 489 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0002 689 SMART serkin_6 489 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu8g0002 689 SUPERFAMILY Protein kinase-like (PK-like) 475 677 IPR011009 -
Pvu8g0002 689 Pfam Protein tyrosine and serine/threonine kinase 494 677 IPR001245 GO:0004672|GO:0006468
Pvu8g0002 689 PANTHER OS07G0166700 PROTEIN 30 677 IPR045272 GO:0004714|GO:0006468
Pvu8g0002 689 Gene3D Transferase(Phosphotransferase) domain 1 565 678 - -
Pvu8g0002 689 PANTHER RECEPTOR-LIKE PROTEIN KINASE HERK 1 30 677 - -
Pvu8g0002 689 Gene3D Phosphorylase Kinase; domain 1 453 564 - -
Pvu8g0002 689 ProSitePatterns Protein kinases ATP-binding region signature. 495 517 IPR017441 GO:0005524
Pvu8g0002 689 ProSitePatterns Serine/Threonine protein kinases active-site signature. 611 623 IPR008271 GO:0004672|GO:0006468
Pvu8g0002 689 Pfam Malectin-like domain 33 384 IPR024788 -
Pvu8g0002 689 Gene3D - 205 386 - -
Pvu8g0002 689 Gene3D - 30 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu8g0002 Pvu-Chr8 135850 138144 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu8g0002 1 677 Receptor kinase-like Gene Family AT3G46290 49.711 0.0 630
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pvu8g0002 Malectin_like 3.5e-31 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu8g0002 - - lang:109328391 944.11