Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2892 ATGGAAACAGCCCTCACTTGCTTCTTCTATGCCAGAGTCCCACCCACACCCAAATTGGGGCATGCTGCAACTGCAACTCCAACTTCAACTCACCTCTTCCCTTTTTTCAATGCCTCCACCCACCTCCGTTCTTCCTTTCGACACTATTGCCTTATTCCAAACGCTACTAACACCACCCAACCCAATGTTTCCACCAACTCCAAAACCCGAAGAAGGAGAAGAAGAAGTTCCCATACTCAGTTGGTGGTGGAGGAGGCTGCTTCTGTCCATCACAACGGAGACCCAATTGGTAAGAAGGATCTCGGGAAGTGTGTCATGAGATGGATTCGCGACAGCATGAGGGCCATGGCGTCTGATTTAGCTGCGGCGGAGATTCTGGGAGAGATGGAGTTGTGGGAGCTCATGGGACCGGGTCTCACTTTTATTATGCAGGCACAGCCTTATCTCAATGCTGTTCCTATGCCCATTGGCCTTGAAGGTGTTTGCTTGAAGGCCTGCACGCACTACCCCACTCTGTTCGACCATTTTCAGAGGGAGCTTCGTGCTGTTCTCCAAGACCTGCAGAACGACAACCCCATTCAGGACTGGCGGGACACCAAGTCCTGGAAACTTCTTAAGCAGCTCGCCAATTCAGCTCAGCATAGGGCAGTTGTGAGAAAGATAGCACAACCCAAGAGTGTCCAAGGCGTTTTAGGAATGGACTTGGAAAAGGTCAAAGCAATACAGCACAGGATTGATGAATTCACCAATCACATGTCAGAACTACTCCGTGTGGAAAGGGATGCTGAATTGGAGTTTACTCAGGAGGAATTAGATGCCGTTCCTAAACCAGATGATGCTTCTGATTCTTCAAAACCTATTGATTTCTTGGTTAGTCATAGCCAGCCTGAACAAGAACTCTGCGATACCATTTGTAATTTAAATGCCATCAGTACCTCTACAGGACTGGGGGGAATGCATTTGGTATTATTCAAGGTTGAAGGGAACCACCGGTTACCACCTACTGCTCTTTCACCTGGAGACATGGTTTGTGTAAGAACGTATGACAGCAGGGGTGCAATTACAACTTCTTGCATACAAGGATTTGTAAACAGTTTTGGAGATGATGGCTATAGTATTACAATTGCTTTAGAGTCACGCCATGGTGATCCTACATTCTCTAAACTATTTGGGAAGAATGTGCGCATTGACCGTATTCAAGGACTGGCTGATACACTGACCTATGAGCGCAACTGTGAAGCTCTAATGCTGCTTCAGAAGAATGGTTTGCGTAAGAAGAATCCTTCAATTTCTGTTGTTGCTACTCTGTTTGGAGACGGAGAAGATGTTGCATGGCTAGAGAAGAATCATTTCGCTGACTGGGCAGAAGAAAAATCTGATGCAATTTTAGGAAGTGAAAGTTTTGACGATACTCAACGGAGAGCAATTGCACTGGGTTTGAATAAAAAAAGGCCTGTATTGGTTGTCCAAGGCCCTCCTGGTACAGGCAAGACTGGTTTGCTCAAGCATCTTATAGCATGTGCTGTTCAGCAAGGTGAACGGGTTCTTGTTACAGCACCTACTAATGCAGCTGTAGATAACATGGTTGAAAAGCTATCAAATGTCAGATTAAATGTTGTGCGGGTTGGAAATCCAGCTCGCATATCAAAAACAGTGGGATCAAAGTCTTTAGAAGAAATTGTAAATGGTAAGCTTGCAAGTTTTCGAGAAGAGTATGAGAGGAAGAAGTCAGATCTAAGAAAAGATCTAAGACATTGTTTAAGGGATGATTCACTAGCTGCGGGCATACGCCAACTTCTTAAGCAGCTGGGAAGGTCACTGAAGAAAAAGGAAAAGCAAACAGTAAATGAAGTTCTATCTAGTGCTCAGGTTGTGCTTGCCACTAATACTGGAGCAGCTGACCCTTTAATTCGAAGGCTAGATACTTTTGACCTGGTAGTCATAGATGAAGCTGGGCAGGCAATTGAACCCTCTTGCTGGATTCCTATATTGCAAGGAAAGCGGTGTATTCTTGCTGGTGATCAATGCCAACTTGCTCCTGTCATATTATCTAGAAAGGCCTTGGAAGGTGGTCTAAGAATATCTCTATTGGAAAGAGCTGCAACTTTGCATGAAGGGATTCTCACCACTAGGTTAACTACACAATACCGTATGAATGATGCTATTTCTAGTTGGGCTTCAAAGGAGATGTACGGAGGATTGTTGAAGTCCTCTGAGACTGTATTTTCTCATCTTCTTGTAGACTCTCCTTTTGTTAAGCCTTCCTGGATAACACAATGCCCACTACTATTGTTAGATACTAGAATGCCATATGGAAGTCTGTCAGTTGGTTGCGAAGAGCATCTAGACCCAGCTGGAACAGGCTCACTTTATAATGAAGGAGAAGCTGAGATAGTTTTGCAGCATGTCTTTTCCTTAATTTACGCTGGTAATGACATTTGA 2442 0.4459 METALTCFFYARVPPTPKLGHAATATPTSTHLFPFFNASTHLRSSFRHYCLIPNATNTTQPNVSTNSKTRRRRRRSSHTQLVVEEAASVHHNGDPIGKKDLGKCVMRWIRDSMRAMASDLAAAEILGEMELWELMGPGLTFIMQAQPYLNAVPMPIGLEGVCLKACTHYPTLFDHFQRELRAVLQDLQNDNPIQDWRDTKSWKLLKQLANSAQHRAVVRKIAQPKSVQGVLGMDLEKVKAIQHRIDEFTNHMSELLRVERDAELEFTQEELDAVPKPDDASDSSKPIDFLVSHSQPEQELCDTICNLNAISTSTGLGGMHLVLFKVEGNHRLPPTALSPGDMVCVRTYDSRGAITTSCIQGFVNSFGDDGYSITIALESRHGDPTFSKLFGKNVRIDRIQGLADTLTYERNCEALMLLQKNGLRKKNPSISVVATLFGDGEDVAWLEKNHFADWAEEKSDAILGSESFDDTQRRAIALGLNKKRPVLVVQGPPGTGKTGLLKHLIACAVQQGERVLVTAPTNAAVDNMVEKLSNVRLNVVRVGNPARISKTVGSKSLEEIVNGKLASFREEYERKKSDLRKDLRHCLRDDSLAAGIRQLLKQLGRSLKKKEKQTVNEVLSSAQVVLATNTGAADPLIRRLDTFDLVVIDEAGQAIEPSCWIPILQGKRCILAGDQCQLAPVILSRKALEGGLRISLLERAATLHEGILTTRLTTQYRMNDAISSWASKEMYGGLLKSSETVFSHLLVDSPFVKPSWITQCPLLLLDTRMPYGSLSVGCEEHLDPAGTGSLYNEGEAEIVLQHVFSLIYAGNDI* 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2892 813 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 467 753 IPR027417 -
Pvu7g2892 813 SMART ultradead3 464 716 IPR014001 -
Pvu7g2892 813 PANTHER DNA2/NAM7 HELICASE FAMILY MEMBER 59 810 - -
Pvu7g2892 813 Gene3D - 716 812 IPR027417 -
Pvu7g2892 813 Coils Coil 569 589 - -
Pvu7g2892 813 SMART AAA_5 483 698 IPR003593 -
Pvu7g2892 813 Gene3D - 271 402 - -
Pvu7g2892 813 CDD DEXXQc_SMUBP2 467 717 - -
Pvu7g2892 813 MobiDBLite consensus disorder prediction 57 80 - -
Pvu7g2892 813 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 59 810 - -
Pvu7g2892 813 Pfam AAA domain 468 684 IPR041677 GO:0004386
Pvu7g2892 813 Pfam AAA domain 694 810 IPR041679 -
Pvu7g2892 813 Gene3D - 253 700 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2892 Pvu-Chr7 51718670 51725981 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2892 462 657 Core DNA Replication Machinery Family AT1G08840 26.768 2.97e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2892 - - pvu:PHAVU_007G280900g 1602.42