Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2890 ATGGATTCATTTTTTCCTGAGAAACTTCTGGGTGAGATTTTCTGGGATCAACCCCTTTTGCGCACTGATCAAAGTGATGTAGTTCAATATTCCCATATCATCAAGGCTGAAGCTTTCCCTCCAGCAACTCAAAGTGCTTTTGTTCCATATACAGATCTACCCAGAAGAAATAACCCTTTAAATGGGTCAAATTCAGAGAGCACGAGTAAGAGAATGCTTGCGTTCTTGAGGAAAAGTTTCCCTCTGGAGAGAAAGAATGTAGAAGAGAATGAAAGAGATCGCAGTTTCAGGCACATGATCAGCGAGAGAATGAGAAGACAGAGACAGAGACAGTGTTGCTTGGCCCTGCATTCAATTTTACCACATGGAACTAAAACAGATAATAACTCTGTAATTCAAGCAGCAGCAAAGGGGATTGTAAGGCTACAAGGATGCAGAGAAGAGCTGCAGAGGAAAAATTGTGAGGCTGAAGCAAATGTTGAAGGTGTTTTTGTGAGGAAGCATGATAGAGGAAGTAAGATTGCACATTTGAGAATTGCACATCCCAAGTGTGGAATTGATTCAATGGTTGAGAGGCTGAAGTGGTTGAAAGAGGAAGGAGTGGACAGCAGGAGCATCAAATCAAGTTTCTCCCCAAAGGAGTTGTTTGCAGTGTTAGAGATAGAGAGTGGTGAGGAGGTATAA 684 0.4211 MDSFFPEKLLGEIFWDQPLLRTDQSDVVQYSHIIKAEAFPPATQSAFVPYTDLPRRNNPLNGSNSESTSKRMLAFLRKSFPLERKNVEENERDRSFRHMISERMRRQRQRQCCLALHSILPHGTKTDNNSVIQAAAKGIVRLQGCREELQRKNCEAEANVEGVFVRKHDRGSKIAHLRIAHPKCGIDSMVERLKWLKEEGVDSRSIKSSFSPKELFAVLEIESGEEV* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2890 227 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 90 156 IPR036638 GO:0046983
Pvu7g2890 227 Gene3D - 83 159 IPR036638 GO:0046983
Pvu7g2890 227 PANTHER TRANSCRIPTION FACTOR BHLH92 1 223 - -
Pvu7g2890 227 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 93 142 IPR011598 GO:0046983
Pvu7g2890 227 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED 1 223 IPR044658 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2890 44 223 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G43650 38.710 6.72e-32 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2890 - - pvu:PHAVU_007G280700g 448.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2890 7 51705227 51706386 Pvu7g2890 7 51705227 51706386 ECH