Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2885 ATGAACACCAAAACAAAATCAACCGCCAGCACAAACAAGATGGCACCCCTCAAACTGCATCACTTCCTCCTTCTCATATTCATCTTCTTCTTCTTGCTCCCTTCTTCCCACGCCCAAACGCCACGTCAGGAGAACAACACGGGCTTCACGTGCACGGGCACCCGCTCCTGCGCCGCCTACGCCTTCTACCGCGCCTCCGCTCCCGACTTCCTGGACCTGGCCGCCGTCGGCGACCTCTTCGAGGTGAGCCGCCTCATGATAGCCGCGCCGAGCAACATCTCCTCCGCGTCCTCCGCCCTGGTCCAAGACCAGCCCCTCTTCGTCCCCTTGAGCTGCTCCTGCAACTCCGTGAATGCCACCTTCGGGTCCCTCTCCTACGCCAACATCTCCTACGTCATCCAACCCAACGACACCTTCTTCACCGTCTCCACCTTCAAGTTCAACAACCTCACCACCTACCCTTCCGTCGAAACCGTCAACCCCACCTTGGTCGCCACCAACCTCTCCATCGGCCAAGTCACCATCTTCCCTGTCTTCTGCAAATGCCCCGACACCAACAACACCAATTACATGATCTCGTACGTTGTGCAGCCCGAGGACAACATCTCCTCCATTGCCTCAACTTTTGGGGTTCAGGAACAAGCTATAATTGACGTCAACAACGACACACTCTATGATTATGACACCATTTTCATCCCGGTGGAGCAGCTTCCGTCTCTGTCGCAGCCTGCGGTGGCTCCAGCTGCGCCGCCTAGTGGGAATGGGAGTGAGAGTGGGAGTGGGAGGGATAGGACGGGGACTGTTAGAGGGTTGGGGATTGGGTTGGGGTTGGTGGGGTTGTTGTTGATATTGGTGAGTGGGGTGTGGGTGTGGAGAGAGTTTGTGATGAAGAAGAGGTTAGGAGTGAAGGATGAGGAAGAGGAGGGAGGGAGGAAGAAGGTGTATTCGGGAGGGAAAGAGGGGCAGAAAGGTGGTTTGGATGTGAACCTCATGGCAAATGTGTCGGATTGTTTGGACAAGTATAGAGTTTTTGAGGTTGAGGAACTGGTGGAGGCCACTGATGGATTTGATAAGAGGTCCTTGATCGAGGGATCCGTTTACAGAGGAAAGATTGATGGGGAGCTCTTTGCCATCAAGAAGATGAAATGGAATGCCTATGAGGAACTCAAGATCTTGCAGAAGGTAAACCATGGGAATCTGGTGAAATTGGAGGGATTCTGCATAGACCCAGAAGAAGCAAACTGCTATCTAGTCTATGAATATGTGGAGAATGGATCTCTATACTCGTGGTTGCACGAGGAGAAAAAGGAAAAGTTGAACTGGAAAACAAGGCTAAGAATAGCCATTGACATTGCCAATGGCCTCCAATACATCCACGAGCACACGAGGCCACGAGTTGTGCACAAAGACATCAAGAGCAGCAACATTCTCTTGGACTACAACAAGAGAGCAAAAATTGCAAATTTTGGGCTTGCAAAGTCTGGAATGAATGCCATCACCATGCACATTGTGGGAACACAGGGCTACATTGCCCCTGAATATCTGGCTGATGGTGTGGTCTCCACAAAGATGGATGTGTTCTCTTTTGGGGTTGTGTTACTTGAACTGATTTCTGGGAAGGAAGCCATCGATAAGGAGGGAAATCTGTTGTGGGCAAGTGCCATCAGAACATTTGAAGTGGAGAGTGAGCAAGAGAAGGTTAGAAGACTGAGGGAATGGTTGGATAAGGATATTTTAAGGGAGACATGCCCAATGGAAAGTTTGATGGGTGTTCTCACAGTTGCAATTGCTTGCTTGCAAAAAGAGCAATCTAAGAGGCCCAGCATAATGGACATTGTCTATGCACTGTGTAAAAGTGAAGATTTGGGCTTTGACATCTCAGATGGTGGGATTGGCTCACCAAGGGTGGTGGCTAGGTAG 1920 0.5073 MNTKTKSTASTNKMAPLKLHHFLLLIFIFFFLLPSSHAQTPRQENNTGFTCTGTRSCAAYAFYRASAPDFLDLAAVGDLFEVSRLMIAAPSNISSASSALVQDQPLFVPLSCSCNSVNATFGSLSYANISYVIQPNDTFFTVSTFKFNNLTTYPSVETVNPTLVATNLSIGQVTIFPVFCKCPDTNNTNYMISYVVQPEDNISSIASTFGVQEQAIIDVNNDTLYDYDTIFIPVEQLPSLSQPAVAPAAPPSGNGSESGSGRDRTGTVRGLGIGLGLVGLLLILVSGVWVWREFVMKKRLGVKDEEEEGGRKKVYSGGKEGQKGGLDVNLMANVSDCLDKYRVFEVEELVEATDGFDKRSLIEGSVYRGKIDGELFAIKKMKWNAYEELKILQKVNHGNLVKLEGFCIDPEEANCYLVYEYVENGSLYSWLHEEKKEKLNWKTRLRIAIDIANGLQYIHEHTRPRVVHKDIKSSNILLDYNKRAKIANFGLAKSGMNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAIDKEGNLLWASAIRTFEVESEQEKVRRLREWLDKDILRETCPMESLMGVLTVAIACLQKEQSKRPSIMDIVYALCKSEDLGFDISDGGIGSPRVVAR* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2885 639 Gene3D LysM domain 191 233 IPR036779 -
Pvu7g2885 639 SMART LysM_2 193 233 IPR018392 -
Pvu7g2885 639 SMART LysM_2 130 177 IPR018392 -
Pvu7g2885 639 Gene3D Transferase(Phosphotransferase) domain 1 422 624 - -
Pvu7g2885 639 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 19 637 - -
Pvu7g2885 639 PANTHER - 19 637 - -
Pvu7g2885 639 CDD LysM 192 232 IPR018392 -
Pvu7g2885 639 SMART serkin_6 356 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g2885 639 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Pvu7g2885 639 Pfam Protein kinase domain 365 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g2885 639 Pfam LysM domain 194 232 IPR018392 -
Pvu7g2885 639 SUPERFAMILY Protein kinase-like (PK-like) 340 616 IPR011009 -
Pvu7g2885 639 ProSiteProfiles Protein kinase domain profile. 300 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g2885 639 Gene3D Phosphorylase Kinase; domain 1 326 421 - -
Pvu7g2885 639 ProSiteProfiles LysM domain profile. 192 238 IPR018392 -
Pvu7g2885 639 MobiDBLite consensus disorder prediction 242 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2885 Pvu-Chr7 51672336 51676057 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2885 22 618 Receptor kinase-like Gene Family AT2G23770 32.962 6.97e-87 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pvu7g2885 Pkinase 4.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2885 - - gmx:100802872 890.952