LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu7g2883	ATGCATAAGGAAGCTGAGGATGACTATGCTTACCTTTCTAACTTACTTCAAGAGTTCACCAGTATTCCCAACATTGACAAGGCATGGCTTTTTGGTTCTCCAGGCTTGCAGTTGCAAGGAATGTTTGCTGTTTCCCAACCAGATCTTTTAACAAACAGGAGGAGGACATCCATCATGTCCTGTAACATTCTAAAAGAAAGGGACAGTTCTGTGAAGTTTCTGTGGGCTCCGTTTCCAATAGAGATGTCTGGCGTGTCTTTGATTGTTCCATCACCGTCTGGCTCAAAACTCTTAGTGGTTCGAAATTCAGAGAATGAAGGTCCTTGTTGCTTTCAGATTTGGAGCTCTTCTCGAATGGAGAAAGAGTTCCTTATTCCTCAATCACTGCATGGCTCAGTATACAATGATGGATGGTTTGAGGGTGTCTCGTGGAACATGAATGAACTATGTATAGCATATGTAGCAGAAGAGCCCTCTCCTGCAAAGCCCACATTTAATGGTTTGGGGGGCTACAAGATAGGTGGTTGTGCAGATAAAGATTCAGGATATTGGAAATGTCAAGGGGACTGGGAGGAGGACTGGGGAGAAACATATGTTGGAAAGAGACAGCCTGCACTATTTGTCATCGACATCAACAGCGGAGAGGTGCAAGAAGTCAAAGGAATTGACAAATCTTTGAGTATTGGCCAAGTTGTGTGGGCTCCATTTACTGAAGGCTCAGAACAATACCTTGTATTTGTTGGGTGGTCATCCAAGCCAAGAAAGCTTGGCATTAAGTACTGCTCTAACAGACCTTGCGCATTATATGCTGTTAGAGTAAGAGCACTGCATCATGAGTCAAAATCTAATGAACCAGTACTCCAGTCAACTGAAGAATTTCATGCGCTGAACCTTACTCAAACTATAAGCAGTGCATTCTTTCCACGGTTCAGCCCAGATGGAAAATTTCTTGTGTTTTTATCTGCAAGAAGTGCTGTGGACTCTGGAGTGCACAATGCTACAAATTCACTTCACAGAATTGATTGGCCAACTGATGGAAAACCGTTCCAATCTTCCAAAATTTACGACATTATTCCTGTTGTGACGTGTGCTGAAGATGGTTGCTTCCCTGGGCTTTATTGTACCACTATTCATAGTAATCCTTGGTTATCTGACAACTGCACAATGATTATATCATCGATCTGGCACAGCAGTGAAGTTCTGATCTCTGTGAATGTGTTGAGTGGGGAAATATTACACATCAGCCCAGCAGATTCAAACTTCTCATGGAATCTTCTTACAATGGATGGGAACAATATTGTTGCCATTTCCAGCAGTCCGGTTGATGTTGCTCAAATAAAGTATGGAATGGCCATTGAGAAGGAGACAAACACTACTACATGGAGTTGGTCAAATATATCCAGTCCCATATTCAGATCCTCTGACAAGGTTAGATCTTTGCTGTCCTGTCTCCAGTGTAGTATACTGAGGATCTCCGTCAAGGATGCTCATGATGGTCAAACAAAAGGTGCTACAAAACCTTTTGAAGCTATATTTGTGTCTTCTAAAACCAATAGCAAGATTGAATTTGATCCATTAATTGTGATCCTTCATGGAGGGCCCCAAGACGTCTCTTTGTCATACTTTTCTAAGTATTATGCTTTTCTATCTTCAGTTGGATACAGCTTGCTGATTGTAAATTACAGAGGTTCATTAGGATTTGGTGAGGAAGCATTGCAATCTCTTCCAGAGAATGTTGGGTCTCAGGATGTCAATGATGTTCTCTCTGCCATAGATCATGTCATCAACTTGGGTCTTGCTAGTCCATCTAAGATTACAGTAATGGGCATTTCACATGGTGGTTTTCTGACAACCCATTTGATTGGCCAGGCACCAGACAAGTTTGTAGCAGCTGCTGCAATCAATCCTGTTTGTAACCTTGCACTGATGATTGGAACAACAGATATCCCTGATTGGTGCTATGTAGAAGCTTGTGGAACCAAAGCCAGAAATTGCTTTACTGAACCACCTTCCCCAGAAGATTTGACTCTCTTTTATAGGAAGTCTCCTATTTCACACGTCTCTAAGGTAAAAGCACCAACATTGTTCCTATTAGGTGCCCAAGATGTTCGTGTTCCAAATTTTGATGGGTTGCAATATGGTCGGGCCTTGAAGGAGAAAGGAGTAGATGTCAAAATCATTATGTTTGAAAATGATGTTCATGCACTCAAAAGGCCACAATCTGACTTTGAATCTTTCCTTAACATTGGGGTGTGGTTCAACAAGTACTGTAAATACGGGGCAAGTGAATCACAAGAATCAAAGGATTAG	2310	0.4182	MHKEAEDDYAYLSNLLQEFTSIPNIDKAWLFGSPGLQLQGMFAVSQPDLLTNRRRTSIMSCNILKERDSSVKFLWAPFPIEMSGVSLIVPSPSGSKLLVVRNSENEGPCCFQIWSSSRMEKEFLIPQSLHGSVYNDGWFEGVSWNMNELCIAYVAEEPSPAKPTFNGLGGYKIGGCADKDSGYWKCQGDWEEDWGETYVGKRQPALFVIDINSGEVQEVKGIDKSLSIGQVVWAPFTEGSEQYLVFVGWSSKPRKLGIKYCSNRPCALYAVRVRALHHESKSNEPVLQSTEEFHALNLTQTISSAFFPRFSPDGKFLVFLSARSAVDSGVHNATNSLHRIDWPTDGKPFQSSKIYDIIPVVTCAEDGCFPGLYCTTIHSNPWLSDNCTMIISSIWHSSEVLISVNVLSGEILHISPADSNFSWNLLTMDGNNIVAISSSPVDVAQIKYGMAIEKETNTTTWSWSNISSPIFRSSDKVRSLLSCLQCSILRISVKDAHDGQTKGATKPFEAIFVSSKTNSKIEFDPLIVILHGGPQDVSLSYFSKYYAFLSSVGYSLLIVNYRGSLGFGEEALQSLPENVGSQDVNDVLSAIDHVINLGLASPSKITVMGISHGGFLTTHLIGQAPDKFVAAAAINPVCNLALMIGTTDIPDWCYVEACGTKARNCFTEPPSPEDLTLFYRKSPISHVSKVKAPTLFLLGAQDVRVPNFDGLQYGRALKEKGVDVKIIMFENDVHALKRPQSDFESFLNIGVWFNKYCKYGASESQESKD*	770

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu7g2883	769	Gene3D	alpha/beta hydrolase	506	757	IPR029058	-
	Pvu7g2883	769	SUPERFAMILY	DPP6 N-terminal domain-like	82	441	-	-
	Pvu7g2883	769	Pfam	Acylamino-acid-releasing enzyme, N-terminal domain	6	274	IPR045550	-
	Pvu7g2883	769	ProSitePatterns	Prolyl endopeptidase family serine active site.	586	616	IPR002471	GO:0004252\|GO:0006508
	Pvu7g2883	769	Pfam	Prolyl oligopeptidase family	542	757	IPR001375	GO:0006508\|GO:0008236
	Pvu7g2883	769	Pfam	WD40-like Beta Propeller Repeat	305	330	IPR011659	-
	Pvu7g2883	769	PANTHER	SERINE PEPTIDASE S9 FAMILY MEMBER	5	758	-	-
	Pvu7g2883	769	SUPERFAMILY	alpha/beta-Hydrolases	525	758	IPR029058	-
	Pvu7g2883	769	PANTHER	ENZYME-LIKE PROTEIN, PUTATIVE-RELATED	5	758	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu7g2883	Pvu-Chr7	51661403	51668684	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu7g2883	522	741	Carbohydrate Esterase	AT5G36210	25.909	8.95e-17	82.8

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu7g2883	K01303		-	gmx:100812681	1397.88

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pvu7g2883	7	51661403	51668684	Pvu7g2883	7	51661403	51668684	ECH

Showing 1 to 1 of 1 entries