Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2879 ATGGAAGCGTCTCCGCCACCACGCACCATCCTCGGCAGGTACCAGCTCACGCGCTTCCTTGGCCGCGGCAACTTCGCCAAAGTGTACCAGGCGCGCTCCCTCGTAGACGGCGCCACGCTCGCCGTCAAGGCCATCGACAAGTCCAAGACGGTCGACGCCGCCATGGAGCCCCGCATCGTGCGCGAGATCGACGCCATGCGCCGCCTCCAGAACCACCCAAACATCCTCAAAATCCACGAGGTCCTCGCCACAAAGACCAAAATCTACCTCGTCGTCGACTACGCCGGCGGAGGCGAGCTCTTCTCCAAGCTCTCCCTGCGCGGCCGCCTCCCGGAGTCCCTGGCGCGGCGCTACTTCTCCCAGCTCGTCTCCGCGCTCCTCTTCTGCCACCGCCACGGCATCGCGCACCGTGACCTCAAGCCGCAGAACCTCCTCCTAGACGCCGCCGGCGACCTTAAGGTTTCCGACTTCGGCCTCTCCGCGCTCCCGGAGCACCTCCGCGATGACCTCCTCCACACCGCCTGCGGCACGCCGGCCTTCACTGCGCCGGAGATCCTACGCCGCGTCGGCTACGACGGCTCCAAGGCCGACGCGTGGTCCTGCGGTGTCATTCTCTACAACCTTCTTGCCGGCCACCTCCCCTTCGACGACTCGAACATTCCGGCCATGTGCCGGCGAATCTCCCGCCGCGACTACCAGTTCCCGGAGTGGATATCGAAATCTGCGCGCAGCCTCATCTACCAATTGCTGGACCCTAACCCTAAATCGCGAATTTCACTGGAAAGAGTTTTCGATTGCAGATGGTTGAGGAATAAGAAAGCGGTTCGCTGTAACGTGTTGGAGGAGAGTGTATTGGAGTCTGATTTGTATAACAAGTGCTGCGACGGTTACAAATTGGGGATGAACGCATTTGACATAATATCGATGTCGTCGGGGTTGGACTTGCGAGGACTGTTCGAGACGACGTCGGAGAAGGGGAGGCGGAGGGAGAAGAGGTTCAGTTCGGAGAAGAGCGTGGGAACGGTGGAAGCGAAGGTTAAGGAGGTTGGGGAGAGGTTAGGGTTTAGGATTGAAGTTGGGAAGAACGGTGCAATTGGGTTGGGAAAGGGGAAGGTGGGTTTGGTGGTTGAGGTGTTTGAGATTGTGTCTGACTTGCTCCTTGTCTCAGTTAAAGTTGTTGATGGTGCCGTTGACTTTGACCTTCTTCATTGGGATGATTGGAGACTTGGCCTTCAAGATCTTGTTCTCTCATGGCATCACAGTGAATGA 1269 0.5855 MEASPPPRTILGRYQLTRFLGRGNFAKVYQARSLVDGATLAVKAIDKSKTVDAAMEPRIVREIDAMRRLQNHPNILKIHEVLATKTKIYLVVDYAGGGELFSKLSLRGRLPESLARRYFSQLVSALLFCHRHGIAHRDLKPQNLLLDAAGDLKVSDFGLSALPEHLRDDLLHTACGTPAFTAPEILRRVGYDGSKADAWSCGVILYNLLAGHLPFDDSNIPAMCRRISRRDYQFPEWISKSARSLIYQLLDPNPKSRISLERVFDCRWLRNKKAVRCNVLEESVLESDLYNKCCDGYKLGMNAFDIISMSSGLDLRGLFETTSEKGRRREKRFSSEKSVGTVEAKVKEVGERLGFRIEVGKNGAIGLGKGKVGLVVEVFEIVSDLLLVSVKVVDGAVDFDLLHWDDWRLGLQDLVLSWHHSE* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2879 422 CDD CIPK_C 302 412 - -
Pvu7g2879 422 Pfam Protein kinase domain 14 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g2879 422 SMART serkin_6 14 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g2879 422 ProSiteProfiles Protein kinase domain profile. 14 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g2879 422 Gene3D Kinase associated domain 1, KA1 304 416 - -
Pvu7g2879 422 PANTHER SERINE/THREONINE KINASE 8 420 - -
Pvu7g2879 422 Pfam NAF domain 301 358 IPR004041 GO:0007165
Pvu7g2879 422 SUPERFAMILY Protein kinase-like (PK-like) 10 276 IPR011009 -
Pvu7g2879 422 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Pvu7g2879 422 ProSiteProfiles NAF domain profile. 296 320 IPR018451 GO:0007165
Pvu7g2879 422 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 8 420 - -
Pvu7g2879 422 Gene3D Transferase(Phosphotransferase) domain 1 7 303 - -
Pvu7g2879 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2879 Pvu-Chr7 51619920 51621531 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2879 3 420 Miscellaneous Gene Families AT3G23000 56.368 1.68e-161 460
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pvu7g2879 Pkinase 1.4e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2879 K12761 - gmx:100305372 697.197