Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2865 ATGAGTTGTGTTGATGATGGTCCTGTGATTGTGAAGGAGGAGGTTCATGGAGAAGGCTTTGTTGCTCCACAACCACTTGAGGGGCTTCATGAAAGTGGTCCTCCACCATTCCTCACAAAGACTTATGACATAGTTGATGATGTTTCCACTGATGACATAGTTTCATGGAGCAGAGAAAACAACAGCTTCGTTGTGTGGGATCCTCAAGCTTTTTCCATCACTCTTCTCCCCAAATACTTCAAACACAACAACTTCTCCAGCTTTGTCAGACAGCTCAATACCTATGGGTTTAAAAAGGTGGATCCTGATAAATGGGAGTTTGCTAATGAAGGGTTTCTCAGAGGACAAAGACATCTATTGAAGATCATAAGGAGGAGGAAGACCACTCATCAACCTCAACCACCACAACAATCTCTGGACCATTGTGTTGAAGTATTGGATGGAGAAATGGATGGGTTGAGACGTGAGAAGCAAGTTCTGATGGTGGAGCTGGTGAAGCTTAGACAACAACAGCAGAACACAAAAGACCACCTTCAATCAATGGAAAATAGGCTAAAAAAGACTGAGCAGAAACAGCAACAGACGATGAAGTTCTTGGCAAGGATAATGCAGAACCCCAACTTCTTGCAACAATTGGTTCAACAAAGGGAGTGGAGGAAAGAGCTGGAGGAAGCTTTTTCCAACAAGAGAAGAAGAGCTATTGATGAAGGGCATAATGATGCTGAAGAATGCTCAGGTTTGGTTAAACTTGAGCAGGAGGAGTGCACTGAGATATCAGAGCTTGAGGTTTCTGACATAGAGCTTGCTATGAACATACAAAGTGAAAGCCAAAAGAAGACTTGTGGTGAAGAACTTGAAAGTAGAAATGGAGGCATTGAGGAAGTACTCTTGGAAGAACTTTTGAATGAGGGTGTTGAAGAAGATCTACTAGCATTGGAAAATGATGACAATGAAGATATAATTTTGTTGTCTCAGGAACTTGGTTATTTAGCCTCTAAATCCTAA 1005 0.4189 MSCVDDGPVIVKEEVHGEGFVAPQPLEGLHESGPPPFLTKTYDIVDDVSTDDIVSWSRENNSFVVWDPQAFSITLLPKYFKHNNFSSFVRQLNTYGFKKVDPDKWEFANEGFLRGQRHLLKIIRRRKTTHQPQPPQQSLDHCVEVLDGEMDGLRREKQVLMVELVKLRQQQQNTKDHLQSMENRLKKTEQKQQQTMKFLARIMQNPNFLQQLVQQREWRKELEEAFSNKRRRAIDEGHNDAEECSGLVKLEQEECTEISELEVSDIELAMNIQSESQKKTCGEELESRNGGIEEVLLEELLNEGVEEDLLALENDDNEDIILLSQELGYLASKS* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2865 334 PRINTS Heat shock factor (HSF) domain signature 37 60 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pvu7g2865 334 PRINTS Heat shock factor (HSF) domain signature 75 87 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pvu7g2865 334 PRINTS Heat shock factor (HSF) domain signature 88 100 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pvu7g2865 334 SUPERFAMILY "Winged helix" DNA-binding domain 32 126 IPR036390 -
Pvu7g2865 334 Gene3D - 29 128 IPR036388 -
Pvu7g2865 334 Coils Coil 150 191 - -
Pvu7g2865 334 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-6B 21 323 - -
Pvu7g2865 334 SMART hsfneu3 33 126 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pvu7g2865 334 ProSitePatterns HSF-type DNA-binding domain signature. 76 100 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pvu7g2865 334 Pfam HSF-type DNA-binding 37 126 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pvu7g2865 334 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 21 323 IPR027725 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2865 Pvu-Chr7 51513590 51515480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2865 23 334 HSF AT3G22830 55.056 7.88e-121 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Pvu7g2865 HSF_DNA-bind 1.6e-31 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2865 K09419 - gmx:100806789 411.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2865 7 51513590 51515480 Pvu7g2865 7 51513590 51515480 ECH