Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2857 ATGGCAGAAACGAAAGAAGGTTCAGGTTCGGAGATGTCTCTGAAGGATCAGGGCAACGAGTTTTTCAAGTCAGGAAAGTATCTCAAAGCTGCTGCACTCTACACTCAAGCCATCAAGCAAGACCCTTCTAACCCTACTCTCTATAGTAATCGTGCTGCAGCATTGCTGCAATTGGATAAGCTTAATAAAGCTCTTGATGATGCTGAGATGACAATCAAATTAAAACCCCAATGGGAAAAGGGATATTTCAGGAAGGGAAGCATATTGGAAGCCATGAAACGATATGACGATGCTTTAGCTGCCTTTCAGATAGCATTGCAGTATAACTCGCAAAGTCAAGAAGTATCAAAAAAGATAAAGAGAATGAACCAACTGGTGAAAGATAGCAAGCGAGCACAAGAAGTGGAGAATATGAGATCGAATGTTGACGTGGCTAAACATTTAGATACATTCAAATCTGAAATGGTGGAGAAGTATGGATCTGAAGAATGCTGGAAACATTTGTTCTCATTCGTTGTTGAGACTATAGAGACTGCTGTAAAATCATGGCTTGAAACATCTACGGTGGATGCTAGAGTTTACTTTCTTCTGGATACGGAAAAGACACAGACTGATAAGTATGCCCCAGTTGTGAATATTGATAAGGCCTTTGAATCACCACATACGCACGCCAATTGCTTTTCATTTCTTAGGCAGTACGCAGAGGAGTCTTTCTCCAAAGCAGCCTGCTTGGTAACTCCCAAAAACATTATTGCTTATCCACAGGTCTGGAAGGGCCAAGGATCAAGAAAGTGGAAACATGCACACAGTGATGGTTTCTTTGTTCAATTTGAGTCACCCTCTCTGCGAAAGCTCTTTTTCATACCTAGTTCAATTGACAAGGGACAGATATTGTGCAGGGATCCAGAGGGTTTGGACATTGGTGTTCATGAAGTTCTTCCCCGGTTATTCAAAGAAAAGATGCCCCAATCTTAG 975 0.4164 MAETKEGSGSEMSLKDQGNEFFKSGKYLKAAALYTQAIKQDPSNPTLYSNRAAALLQLDKLNKALDDAEMTIKLKPQWEKGYFRKGSILEAMKRYDDALAAFQIALQYNSQSQEVSKKIKRMNQLVKDSKRAQEVENMRSNVDVAKHLDTFKSEMVEKYGSEECWKHLFSFVVETIETAVKSWLETSTVDARVYFLLDTEKTQTDKYAPVVNIDKAFESPHTHANCFSFLRQYAEESFSKAACLVTPKNIIAYPQVWKGQGSRKWKHAHSDGFFVQFESPSLRKLFFIPSSIDKGQILCRDPEGLDIGVHEVLPRLFKEKMPQS* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2857 324 ProSiteProfiles TPR repeat profile. 79 112 IPR019734 GO:0005515
Pvu7g2857 324 Coils Coil 51 71 - -
Pvu7g2857 324 Gene3D Tetratricopeptide repeat domain 11 125 IPR011990 GO:0005515
Pvu7g2857 324 PANTHER TPR REPEAT CONTAINING PROTEIN 13 320 IPR045248 GO:0006457|GO:0030544|GO:0051879
Pvu7g2857 324 ProSiteProfiles TPR repeat profile. 11 44 IPR019734 GO:0005515
Pvu7g2857 324 SMART tpr_5 45 78 IPR019734 GO:0005515
Pvu7g2857 324 SMART tpr_5 79 112 IPR019734 GO:0005515
Pvu7g2857 324 SMART tpr_5 11 44 IPR019734 GO:0005515
Pvu7g2857 324 Pfam TPR repeat 18 58 - -
Pvu7g2857 324 PANTHER STRESS-INDUCED-PHOSPHOPROTEIN 1 13 320 - -
Pvu7g2857 324 SUPERFAMILY TPR-like 13 121 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2857 7 154 U-box Gene Family AT3G07370 25.455 6.00e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2857 - - gmx:100790717 590.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2857 7 51448676 51453677 Pvu7g2857 7 51448676 51453677 ECH