Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2815 ATGGTTAGAGCTCCTTGTTGTGAAAAGATGGGATTGAAGAAGGGTCCTTGGACCCAAGAGGAAGATCAAACCCTAATCTCATACATCCAAAAACATGGCCATGGAAACTGGCGTGCCCTTCCAAAGCTTGCAGGGCTATTGAGGTGTGGAAAGAGTTGCAGACTGCGATGGATTAACTACTTGAAACCAGACATCAAAAGAGGAAATTTCTCAAGTGAAGAAGAAGATATTATCATCAAGATGCATGAGTTGCTGGGAAATAGGTGGTCAGCAATAGCAGCAAAACTACCAGGAAGAACAGACAATGAAATTAAAAATGTGTGGCACACTCACTTGAAGAAGAAGCTGCTGAATTCAGAACCCAAAAGGGTTTCCAATCCAAAAATCAAACGATCTGATTCCAATTCCAGCACCCTAACTCAATCAGAACCCACATCATCATCATCACCAAGCACAACTTCTTCCAGTGAATTTTCATCATTCAGTGACATGAACAACACCACCATGATCAAGAGTGAAGACACAGAGTCTGAGGAGATAACCATGCCTCCAATTGATGAAAGCTTTTGGTCAGAGGAAACAGTGATGCCATCATCAAATTCTTGGACAGTTTCAAATGATCACCACCAATACCAATTTGATTCAGTGGAAACCTTCCAACAACACAGTTTTGGCTATAATGGTTCAAACTTTGATGATGGAATGGATTTTTGGTATGACATATTCATCAGATCAGGAGAGTCAATAGAATTGCCTGATTTTTGA 765 0.4065 MVRAPCCEKMGLKKGPWTQEEDQTLISYIQKHGHGNWRALPKLAGLLRCGKSCRLRWINYLKPDIKRGNFSSEEEDIIIKMHELLGNRWSAIAAKLPGRTDNEIKNVWHTHLKKKLLNSEPKRVSNPKIKRSDSNSSTLTQSEPTSSSSPSTTSSSEFSSFSDMNNTTMIKSEDTESEEITMPPIDESFWSEETVMPSSNSWTVSNDHHQYQFDSVETFQQHSFGYNGSNFDDGMDFWYDIFIRSGESIELPDF* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2815 254 CDD SANT 69 112 IPR001005 -
Pvu7g2815 254 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pvu7g2815 254 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Pvu7g2815 254 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Pvu7g2815 254 CDD SANT 16 61 IPR001005 -
Pvu7g2815 254 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Pvu7g2815 254 Gene3D - 13 66 - -
Pvu7g2815 254 SUPERFAMILY Homeodomain-like 10 108 IPR009057 -
Pvu7g2815 254 Gene3D - 68 144 - -
Pvu7g2815 254 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 247 - -
Pvu7g2815 254 SMART sant 13 63 IPR001005 -
Pvu7g2815 254 SMART sant 66 114 IPR001005 -
Pvu7g2815 254 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pvu7g2815 254 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Pvu7g2815 254 PANTHER TRANSCRIPTION FACTOR MYB15 1 247 - -
Pvu7g2815 254 MobiDBLite consensus disorder prediction 130 171 - -
Pvu7g2815 254 MobiDBLite consensus disorder prediction 119 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2815 Pvu-Chr7 51164353 51166600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2815 1 254 MYB Transcription Factor Family AT2G31180 50.388 1.00e-79 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pvu7g2815 Myb_DNA-binding 1.1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2815 K09422 - gmx:100806975 391.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1669 1 42151743 42153707 Pvu7g2815 7 51164353 51166600 PCT