Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2811 ATGGATTCTTCTTCTTCTTCCATTCTCTATTCATCAAACTCCCCAGAATCCCCAATGGGATCCCCTCATCACCATCTCCCTTTCAACGAAAACGACCCTGAAGAGATGCTTCTCTATGGGATGATCACCTCATATCAAGAGAGAAGCAGCTCCTGCAAACTCATCATCAAAGAAGAAGAGGTGAGTAACAGTAGTAGCAGAAAGAGTTTCCGAGGTGTGAGGAGACGGCCATGGGGAAAGTTCGCGGCGGAGATAAGAGATTCTACCCGACATGGCATAAGGGTATGGCTTGGAACATTCGACAACGCGGAGGCTGCTGCGTTGGCGTACGACCAAGCCGCCTTTGCCATGCGAGGCTCTGCTGCAGTTCTTAACTTTCCGGTGGAGAAGGTGAAGGAGTCACTCAGAGACATGGATTGCTCACTCTCTCAGCTTCAAGGCTGCTCTCCCGTTGTGGCCCTGAAGAGGAGACATTCCTTGGGACGCAAAATGGCTGCAAAGAAGACGAAGAAGAAGGAAGAGAGTGATGGTGGTGGTGGTGGTGGTGGTGTTAGGGTGGAGAACGTGGTTGTGTTGGAAGACTTGGGGGCAGAGTATTTGGAACAGTTGTTGATGATGTCTTCTGGTGATGCTTGGTGA 639 0.5039 MDSSSSSILYSSNSPESPMGSPHHHLPFNENDPEEMLLYGMITSYQERSSSCKLIIKEEEVSNSSSRKSFRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDNAEAAALAYDQAAFAMRGSAAVLNFPVEKVKESLRDMDCSLSQLQGCSPVVALKRRHSLGRKMAAKKTKKKEESDGGGGGGGVRVENVVVLEDLGAEYLEQLLMMSSGDAW* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2811 212 MobiDBLite consensus disorder prediction 161 181 - -
Pvu7g2811 212 MobiDBLite consensus disorder prediction 1 19 - -
Pvu7g2811 212 MobiDBLite consensus disorder prediction 1 30 - -
Pvu7g2811 212 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1B 18 206 - -
Pvu7g2811 212 Pfam AP2 domain 70 119 IPR001471 GO:0003700|GO:0006355
Pvu7g2811 212 SUPERFAMILY DNA-binding domain 70 129 IPR016177 GO:0003677
Pvu7g2811 212 PRINTS Ethylene responsive element binding protein signature 70 81 IPR001471 GO:0003700|GO:0006355
Pvu7g2811 212 PRINTS Ethylene responsive element binding protein signature 109 129 IPR001471 GO:0003700|GO:0006355
Pvu7g2811 212 CDD AP2 68 128 IPR001471 GO:0003700|GO:0006355
Pvu7g2811 212 Gene3D AP2/ERF domain 68 129 IPR036955 GO:0003700|GO:0006355
Pvu7g2811 212 PANTHER DNA-BINDING DOMAIN 18 206 IPR044808 GO:0003700|GO:0009873
Pvu7g2811 212 SMART rav1_2 69 133 IPR001471 GO:0003700|GO:0006355
Pvu7g2811 212 ProSiteProfiles AP2/ERF domain profile. 69 127 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2811 Pvu-Chr7 51127595 51128470 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2811 26 204 AP2-EREBP Transcription Factor Family AT3G23240 60.656 2.78e-70 212
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pvu7g2811 AP2 4.7e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2811 K14516 - gmx:100780576 253.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1661 1 41973984 41974619 Pvu7g2811 7 51127595 51128470 PCT