Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2809 ATGATGAATGAAGAGGGCTCAAAGGGAAAGAGCAAGGATGAAGAAGAGCATGTAAAGTACAGAGGGGTACGTAGGAGGCCATGGGGAAAATATGCAGCAGAGATTCGTGACTCAATGAGACATGGTCAAAGGTTGTGGTTGGGAACATTCACCACAGCAGAAGAAGCTGCTAGAGCCTATGACAGAGCTGCATATGCCATGAGGGGTCCCTTTGCAGTCCTCAATTTTCCTGATCAATACCCTCCTTCACCAGCTGCTTCTTCTTCTTCTTCTTCTTCTGTCAATGCTTCTTCTTCATCTTCTTCTGTACCCTCTTCTTCAAGCCATGGAAGAGGAAGAGGAAGAGGAAGGAGTGAAGAAGCAAGTGAAGTGTTTGAGTTTGAGTACTTTGATGACAAATTGTTGGAGGAGCTTCTTGGTTATGATGACAAAAATGAGCACGGCAAGTGA 450 0.4511 MMNEEGSKGKSKDEEEHVKYRGVRRRPWGKYAAEIRDSMRHGQRLWLGTFTTAEEAARAYDRAAYAMRGPFAVLNFPDQYPPSPAASSSSSSSVNASSSSSSVPSSSSHGRGRGRGRSEEASEVFEFEYFDDKLLEELLGYDDKNEHGK* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2809 149 CDD AP2 19 79 IPR001471 GO:0003700|GO:0006355
Pvu7g2809 149 SUPERFAMILY DNA-binding domain 19 79 IPR016177 GO:0003677
Pvu7g2809 149 MobiDBLite consensus disorder prediction 81 111 - -
Pvu7g2809 149 Gene3D AP2/ERF domain 18 78 IPR036955 GO:0003700|GO:0006355
Pvu7g2809 149 ProSiteProfiles AP2/ERF domain profile. 19 77 IPR001471 GO:0003700|GO:0006355
Pvu7g2809 149 MobiDBLite consensus disorder prediction 76 121 - -
Pvu7g2809 149 Pfam AP2 domain 19 69 IPR001471 GO:0003700|GO:0006355
Pvu7g2809 149 SMART rav1_2 19 83 IPR001471 GO:0003700|GO:0006355
Pvu7g2809 149 PRINTS Ethylene responsive element binding protein signature 20 31 IPR001471 GO:0003700|GO:0006355
Pvu7g2809 149 PRINTS Ethylene responsive element binding protein signature 43 59 IPR001471 GO:0003700|GO:0006355
Pvu7g2809 149 MobiDBLite consensus disorder prediction 1 23 - -
Pvu7g2809 149 PANTHER ETHYLENE RESPONSE FACTOR 5 143 - -
Pvu7g2809 149 PANTHER DNA-BINDING DOMAIN 5 143 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2809 Pvu-Chr7 51105207 51105858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2809 14 139 AP2-EREBP Transcription Factor Family AT3G23230 57.143 1.49e-38 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pvu7g2809 AP2 2.9e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2809 - - gmx:100781117 165.236