Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2807 ATGGATTCCTTAGATGACACCAGCTGTTGGGATTTTCTCGATTACTCTTTCATCGATCAAGCGCCTTCTGATTTCCTTTGGCCCAATCACAGTTTGAGCACTGAAATTGACATTCCAGATGATGCTGCTGCTTGTGAAGAGAACATCAAGAAAAGGGTGCGTACTGATTCGTGCTGTAAGGCGGGTTCAAAAGCATGCCGTGAGAAATTGCGAAGGGAGAGACTCAATGAAAGGTTCTGTGACCTGAGCTCTGTTTTGGAACCTGGGAGACCTTTGAGAACAGATAAACCATCTATACTTGATGATGCTATCAGAGTCTTGAGCCAACTTAAAACTGAAGCTGAGGAACTGAAAACAAAAAATGAAAAATTATTAGAGGAAATAAAATGTTTAAAGGCCGAGAAAAACGAACTTCGTGAAGAGAAACTTGTTCTGAAAGCAGATAAGGAGAGGATTGAGAAGCAGTTGAAATCCATGCCCGTGGCACCAGCAGGGTTTATGGCACCCCCTGTAGCTGCTGCTGCTGCATATCAAGCAGGAGTGAACAAGATGGCTGTTTATCCAAATTATGGCTACATCCCAATGTGGCAATATCTTCCTCAATCTGCCAGAGATACATCCCAAGATCATGAGCTTAGGCCTCCTGCTGCATAG 654 0.4373 MDSLDDTSCWDFLDYSFIDQAPSDFLWPNHSLSTEIDIPDDAAACEENIKKRVRTDSCCKAGSKACREKLRRERLNERFCDLSSVLEPGRPLRTDKPSILDDAIRVLSQLKTEAEELKTKNEKLLEEIKCLKAEKNELREEKLVLKADKERIEKQLKSMPVAPAGFMAPPVAAAAAYQAGVNKMAVYPNYGYIPMWQYLPQSARDTSQDHELRPPAA* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2807 217 CDD bHLH_AtILR3_like 64 139 - -
Pvu7g2807 217 SMART finulus 65 116 IPR011598 GO:0046983
Pvu7g2807 217 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 59 110 IPR011598 GO:0046983
Pvu7g2807 217 Pfam Helix-loop-helix DNA-binding domain 63 110 IPR011598 GO:0046983
Pvu7g2807 217 PANTHER BHLH TRANSCRIPTION FACTOR 1 217 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
Pvu7g2807 217 PANTHER TRANSCRIPTION FACTOR BHLH104 1 217 - -
Pvu7g2807 217 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 65 137 IPR036638 GO:0046983
Pvu7g2807 217 Gene3D - 62 143 IPR036638 GO:0046983
Pvu7g2807 217 Coils Coil 100 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2807 Pvu-Chr7 51090793 51094580 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2807 50 217 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G14410 68.639 1.07e-76 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pvu7g2807 HLH 2.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2807 - - gmx:100787583 343.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2807 7 51090793 51094580 Pvu7g2807 7 51090793 51094580 ECH