Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2787 ATGTTGCAGGATGTTATCCAACCCCCAACACCAGATGAGCAACTCCCCATTGATGAGATTTCAAGCCCAATCAGTGCTCGAATTTTCGAACTTTGTGACCCTGATTTTTTCCCAGACACACTGCAAAATTCTGAGGTTACCTCCAGCTCCAATTGTTGCCATGAAGAGAAGTCCTCATATGCCACAACCATATCTCCACCTTTAGATGTAGTAGACAACAAGATCAATATCAATAGCAATAGCAACATAGTCACCACCTCATCTAGTACTACCACAGCCAGCACCACTACCAACAACAACATCAACAACAACACAACAAACAGCAATAACCTGTCCATCTTCTTTGACTCTCAAGATGAAATTGACAATGACATATCAGCCTCCATAGACTTCTCATCATCTCCATCTTTTGCTGTTCCACCACTTCTTGCAATCACAACTCAGCAGGATCAGTTTGATTTCTCTTCAGCTCAGCCACAGGTGCAGCTATCAGCAGCAGGTTCAGTTTTGAAGGGCCTTGCTCATTACCCTACTGATCCTGTGGTTGCACCCCTTATTGGGGCTCCATTAGCATCAGTTTTTGATGATGATTGCATCTCTTCCATCCCTTCTTTTTTGCCTCTCAACCCTTCATCTCCCTCTTGTTCTTATCTCGGTCCTGGCATAGGAGCCTACATGCCTCCTCCTGGTTCCCTTACCACTGCCTTGTCTGCAGAGAGTTCTGGATTGTTTGGTGCCAACATTCTACTGGGGTCTGAACTGCAGACACAAGAACTGGACTACCAGGGAGAAAACGGTGGAATATATTGTACAGATTCAATTCAGAGGGTGTTTAACCCCCAAGACCTTCAGGCACTTGGTACTGAGAGTCAGAAACTGGTATCTGCAGCTGGGGGCTCCGGAACTTTGGCACCAGAAATTTCACACTTGGAGGATTCTACCTTGAAGGTTGGAAAACTTTCTGTTGAGCAGAGGAAGGAAAAGATTCATAGATACATGAAGAAGAGAAATGAAAGAAACTTCAGCAAGAAAATCAAGTATGCTTGCCGCAAAACTTTGGCAGATAGCAGGCCCCGGGTCAGAGGAAGGTTTGCAAAGAATGATGACTTTGGAGATAGCCATAGACAAGGAAGTAGCAACCATGAAGAAGATGAGGAAGAGATAACTGTGAAAGAAGATGATGATATGGTTGATTCCTCAGATATCTTTGCACATATCAGTGGAGTGAACTCTTTCAAATGCAACTATTCCATCCAATCCTTGATTTGA 1269 0.4405 MLQDVIQPPTPDEQLPIDEISSPISARIFELCDPDFFPDTLQNSEVTSSSNCCHEEKSSYATTISPPLDVVDNKININSNSNIVTTSSSTTTASTTTNNNINNNTTNSNNLSIFFDSQDEIDNDISASIDFSSSPSFAVPPLLAITTQQDQFDFSSAQPQVQLSAAGSVLKGLAHYPTDPVVAPLIGAPLASVFDDDCISSIPSFLPLNPSSPSCSYLGPGIGAYMPPPGSLTTALSAESSGLFGANILLGSELQTQELDYQGENGGIYCTDSIQRVFNPQDLQALGTESQKLVSAAGGSGTLAPEISHLEDSTLKVGKLSVEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDDFGDSHRQGSSNHEEDEEEITVKEDDDMVDSSDIFAHISGVNSFKCNYSIQSLI* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2787 422 MobiDBLite consensus disorder prediction 360 385 - -
Pvu7g2787 422 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 17 422 - -
Pvu7g2787 422 ProSiteProfiles CCT domain profile. 325 367 IPR010402 GO:0005515
Pvu7g2787 422 PANTHER CCT MOTIF FAMILY PROTEIN 17 422 - -
Pvu7g2787 422 MobiDBLite consensus disorder prediction 360 392 - -
Pvu7g2787 422 Pfam CCT motif 325 367 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2787 Pvu-Chr7 50897861 50902491 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2787 325 383 C2C2-CO-like Transcription Factor Family AT5G57660 46.875 1.35e-11 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pvu7g2787 CCT 5.6e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2787 - - gmx:100793417 669.463