Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2780 ATGAAGTTCTTTTCTCTTCTCAAAAACAACACCACCGCCAACAACCACCATCACCGATCCTCCACCTCCTCCTCCTCCTCCTGGCCCTGGCCCTCCTGCCACCAACCCAGAACCCTCTCATTCAGAGCCGCCGCCACCGCCGCCACAACCAACGACGACGTTTTCAAAGGCACCAACTCAACCGCCTCTCAAACTCCGGATTCCTTCTTCACGGACTCCCCCAACTCCGCCAGCTTCTCTTCCGCTTCCAACGCATCCCGCGCCGTGGACCCCACCGAGACGGTTATTCGCGGCCTTCGCTCGGACCGGCTTTTCTTCGAACCGGACCAGACCAGCTCCATATGGGAGGCGAAACTCGCCACCCTCGCACCCTTCAAAAACAGCGTGGTCTTCTCCATGGACTCCACGCACCCTTACGTGGATTTCCGCAGGTCCATGGAGGACATGGTGGCCACCCACAGCGTCACTGACTGGGAGGATCTCGAGGACCTTCTCTGCTGGTTCTTCAAGGTCAATGCTCCCAACACTCACCACTATATCCTCCATGCTTTCGTCGATTTCTTGTTCGCTCTCGCACTCGCTTCTTCTTCTTCTTCTTCCTCTAACGCCATTTGTAGCACCACCACCACCGTCTCTTCTCTCTCTTCTTCTCCTTCCTCTTGCACCACTCACTGCACTCTCTGTCTTGATGAAGAAGTTGAACACCAACACACTTCTTAA 720 0.5556 MKFFSLLKNNTTANNHHHRSSTSSSSSWPWPSCHQPRTLSFRAAATAATTNDDVFKGTNSTASQTPDSFFTDSPNSASFSSASNASRAVDPTETVIRGLRSDRLFFEPDQTSSIWEAKLATLAPFKNSVVFSMDSTHPYVDFRRSMEDMVATHSVTDWEDLEDLLCWFFKVNAPNTHHYILHAFVDFLFALALASSSSSSSNAICSTTTTVSSLSSSPSSCTTHCTLCLDEEVEHQHTS* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2780 239 ProSiteProfiles OVATE domain profile. 131 190 IPR006458 -
Pvu7g2780 239 Pfam Transcriptional repressor, ovate 135 191 IPR006458 -
Pvu7g2780 239 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 224 IPR038933 GO:0045892
Pvu7g2780 239 MobiDBLite consensus disorder prediction 65 85 - -
Pvu7g2780 239 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 1 224 - -
Pvu7g2780 239 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 129 192 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2780 Pvu-Chr7 50813520 50814239 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pvu7g2780 Ovate 8.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2780 - - pvu:PHAVU_007G269900g 386.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2780 7 50813520 50814239 Pvu7g0244 7 1711706 1712803 ECH
Pvu7g2780 7 50813520 50814239 Pvu7g2780 7 50813520 50814239 ECH
Pvu1g2010 1 45997952 45998951 Pvu7g2780 7 50813520 50814239 PCT