Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2762 ATGACAGTGGCACTGACAAAGTCTTTGCCGTTGCTCCTTTTCTCGCTGTGGACGGTAGTGTTAACCGAAACGGACCCGAACGATGTGGGGATTCTGAACAGTTTTCGAAGAGGTTTGAAGAACAAGGAGCTCTTACCGTGGCCGGAAGAAGGAGGAGACCCGTGTGGGAATCCTCCATGGAAGTACATCTTCTGCAATGGCAACAGAGTATCTCAGATTCAGACCAAGAACTTGGATCTGGTGGGCCCGCTACCCTCCAACTTCAACAAGCTTTCCATGTTGGAGAATCTGGGTATGCAGAACAACAACCTCAACGGGCCCTTACCCTCCTTCAATGGCTTGTCAAACTTGAAATACGCGTTTCTCAACCGCAACGGCTTTGAATCCATTCCCGGGGATTTTTTCCGAGGGCTTCGGAGTCTCCAGGTGTTGGCTTTGGATTACAATAATCTCAATGCCTCTTCTGGTGGCTGGGTGCTTCCTCAAACTTTGGAAGATTCGGCGCAGTTGAGGAACTTTTCTTGCATGAGCTGCAACTTGGTGGGTCCCATTCCTGCGTTTCTCGGCTCCTTGCCGTCGCTGGAGGTGCTGCAGCTCTCCGGGAATAGCTTGACCGGGGAGATTCCGGCGGCGTTGAACGCCGTTCCGGCGTTGCAGATTCTCTGGCTAAACAACCAGCGCGGGGACGGACTTACTGGGAAAATCGAAGTTGTTGCGAGCATGATTTCATTGACGAGTTTGTGGCTTCACGGGAATAAGTTTAGCGGGAGTATTCCGATGAACATTGGGGATTTGGTCTCGCTGAGGGATTTGGATCTTAATGGGAATGAGTTTGTTGGGTTGATTCCGCGTGGTTTGAGTGGGATGAAGTTGCAGCGGTTGGATTTGAATAATAATCACTTCATGGGTCCGATCCCTGATTTTGCTGCGGATAAAGTGAGTTTTGAAAGCAATAATTTTTGCTTGTCGAAGCCTGGGGTTATGTGTGCGTTTGAGGTGATGGCGCTGTTGGATTTTCTTGGGGGGTTGGGTTACCCTCAGATTTTGGTTGATTCGTGGAGTGGGAATAATCCGTGTGATGGGCCATGGTTGGCGATAAAGTGCAATGGGGATGGAAAGGTGGAAATGATTATTTTGAGTAACTTTAATCTTAGTGGTACTTTGAGTCCTTCTGTTGCCAAGTTGGATTCTCTTGTTGGAATAAGGTTGGGAGGTAATGATATCAGTGGTAGGATACCCAGTAATTGGACTAGTTTGAGATCATTGACATTGTTGGATCTGAGTGGTAATAACATATCTCTTCCCTTCCCGAGTTTTGGGAAAGGGGTGAAGCTTGTGATTGATGCCCCAGAAGTTTCTCTTTCTCCACCAGGTTCTGGTTCTGGTCCTAGTCCTGGTTCTGGTTCTGGTAAGGTTGAACCTCCTTCATCTGATAAGGGTAATCCTAATCCATCTGAAGAATCTAGTCCCAATCCAAAGCCTCGCAGTGTTTCTCTTGAGTCAAATAATTCCAGAGGGAAAAGCTTGGTTCTAATTGTGGCTCCTATTGCAGGTGTTGCAGCTGCGGCTTTTGTTCTCATTCCGCTTTATGTGTATTGTTTCAGGAAGAGAAAGGGTGTCTCTGACAGAGCAGGGTCTCTGGTGATTCACCCCGGAGATCCTTCAGACTCGAACATTGCGCTGAAGGTTGTAATTGCTAACAACAACAATGGGAGTGTTTCAGCAGTGACTGGCGCTGGGTCTGGGACTCTAAATGGAAGTGGGGAGTCTCATGTCATTGAATCTGGGAACCTTGTGATATCGGTTCAGGTCCTTCGAAATGTGACCAAGAATTTTGCACGGGAGAATGAGCTTGGACGCGGTGGATTTGGAGTAGTTTACAAGGGAGAATTGGATGATGGGACTAAGATTGCGGTGAAACGAATGGAATCGGGTGTCATTACCAGCAAAGCCTTGGATGAGTTCCAGTCTGAGATTGCAGTTCTATCAAACGTCCGGCACCGGCATTTGGTATCTCTATTGGGTTATTCAGTTGAAGGTAATGAGAGGATTCTGGTTTATGAGTATATGCCACAAGGGGCTCTCAGTATGCATCTTTTCCACTGGAAGACCTTGCAACTGGAACCACTCTCTTGGAAGAGGAGGCTCAATATTGCATTGGATGTTGCTAGAGGAATGGAGTATCTTCACAGTCTGGCACACCAGATCTTCATCCACAGAGATCTTAAATCATCAAATATTTTGCTTGGGGATGATTTTAGAGCAAAAGTCTCGGATTTTGGATTGGTAAAACTTGCTCCTGATGGCAAAAAATCTGTAGTGACCCGGCTTGCTGGTACATTTGGATACTTGGCACCAGAATATGCAGTGACAGGCAAAGTCACCACCAAAGCAGATGTTTTCAGTTTCGGTGTGGTGCTAATGGAGCTGCTAACTGGATTAATGGCACTTGACGAGGATAGACCTGAGGAAAGCCAGTACCTGGCATCGTGGTTCTGGCATGTAAAATCAGACAAGGAGAAACTAATGGCTGCTGTTGACCCTGCCCTTGACATAAAGGAAGAAATGTTCGACATTGTCTCCATCATAGCCGAGTTAGCTGGGCACTGCACTGCCAGAGAACCATACCAAAGACCAGATATGAGTCATGCTGTGAATGTTCTTGGACCGCTTGTTGAGAAATGGAAACCACTAGATGATGACACCGAGGAGTATTCTGGCATAGACTACACTCTTCCCCTTAACCAAATGGTGAAGGATTGGCAAGAGACAGAAGGAAAGGAGTTGAGCTATGTGGACCCGCAGGACAGTAAGAGTAGTATCCCTGCAAGGCCTACTGGGTTTGCAGAGTCTTTCACTTCTGTTGATGGCCGCTGA 2877 0.4724 MTVALTKSLPLLLFSLWTVVLTETDPNDVGILNSFRRGLKNKELLPWPEEGGDPCGNPPWKYIFCNGNRVSQIQTKNLDLVGPLPSNFNKLSMLENLGMQNNNLNGPLPSFNGLSNLKYAFLNRNGFESIPGDFFRGLRSLQVLALDYNNLNASSGGWVLPQTLEDSAQLRNFSCMSCNLVGPIPAFLGSLPSLEVLQLSGNSLTGEIPAALNAVPALQILWLNNQRGDGLTGKIEVVASMISLTSLWLHGNKFSGSIPMNIGDLVSLRDLDLNGNEFVGLIPRGLSGMKLQRLDLNNNHFMGPIPDFAADKVSFESNNFCLSKPGVMCAFEVMALLDFLGGLGYPQILVDSWSGNNPCDGPWLAIKCNGDGKVEMIILSNFNLSGTLSPSVAKLDSLVGIRLGGNDISGRIPSNWTSLRSLTLLDLSGNNISLPFPSFGKGVKLVIDAPEVSLSPPGSGSGPSPGSGSGKVEPPSSDKGNPNPSEESSPNPKPRSVSLESNNSRGKSLVLIVAPIAGVAAAAFVLIPLYVYCFRKRKGVSDRAGSLVIHPGDPSDSNIALKVVIANNNNGSVSAVTGAGSGTLNGSGESHVIESGNLVISVQVLRNVTKNFARENELGRGGFGVVYKGELDDGTKIAVKRMESGVITSKALDEFQSEIAVLSNVRHRHLVSLLGYSVEGNERILVYEYMPQGALSMHLFHWKTLQLEPLSWKRRLNIALDVARGMEYLHSLAHQIFIHRDLKSSNILLGDDFRAKVSDFGLVKLAPDGKKSVVTRLAGTFGYLAPEYAVTGKVTTKADVFSFGVVLMELLTGLMALDEDRPEESQYLASWFWHVKSDKEKLMAAVDPALDIKEEMFDIVSIIAELAGHCTAREPYQRPDMSHAVNVLGPLVEKWKPLDDDTEEYSGIDYTLPLNQMVKDWQETEGKELSYVDPQDSKSSIPARPTGFAESFTSVDGR* 959
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2762 958 MobiDBLite consensus disorder prediction 928 958 - -
Pvu7g2762 958 ProSitePatterns Serine/Threonine protein kinases active-site signature. 737 749 IPR008271 GO:0004672|GO:0006468
Pvu7g2762 958 ProSitePatterns Protein kinases ATP-binding region signature. 618 640 IPR017441 GO:0005524
Pvu7g2762 958 MobiDBLite consensus disorder prediction 454 501 - -
Pvu7g2762 958 Gene3D Phosphorylase Kinase; domain 1 581 689 - -
Pvu7g2762 958 ProSiteProfiles Protein kinase domain profile. 612 892 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g2762 958 CDD STKc_IRAK 618 891 - -
Pvu7g2762 958 SUPERFAMILY L domain-like 25 306 - -
Pvu7g2762 958 Pfam Protein tyrosine and serine/threonine kinase 615 887 IPR001245 GO:0004672|GO:0006468
Pvu7g2762 958 SMART LRR_typ_2 114 137 IPR003591 -
Pvu7g2762 958 SMART LRR_typ_2 265 288 IPR003591 -
Pvu7g2762 958 SMART LRR_typ_2 419 441 IPR003591 -
Pvu7g2762 958 SMART LRR_typ_2 138 167 IPR003591 -
Pvu7g2762 958 SMART LRR_typ_2 191 215 IPR003591 -
Pvu7g2762 958 Gene3D Transferase(Phosphotransferase) domain 1 690 908 - -
Pvu7g2762 958 PANTHER OSJNBA0070M12.3 PROTEIN 10 958 - -
Pvu7g2762 958 SUPERFAMILY L domain-like 332 443 - -
Pvu7g2762 958 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Pvu7g2762 958 Pfam Leucine rich repeat N-terminal domain 334 369 IPR013210 -
Pvu7g2762 958 Gene3D Ribonuclease Inhibitor 26 327 IPR032675 -
Pvu7g2762 958 SMART serkin_6 612 892 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g2762 958 PANTHER RECEPTOR PROTEIN KINASE TMK1-LIKE 10 958 - -
Pvu7g2762 958 Gene3D Ribonuclease Inhibitor 331 448 IPR032675 -
Pvu7g2762 958 MobiDBLite consensus disorder prediction 457 501 - -
Pvu7g2762 958 SUPERFAMILY Protein kinase-like (PK-like) 590 888 IPR011009 -
Pvu7g2762 958 MobiDBLite consensus disorder prediction 933 947 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2762 Pvu-Chr7 50655488 50659577 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2762 82 925 Receptor kinase-like Gene Family AT1G55610 29.667 8.66e-77 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Pvu7g2762 PK_Tyr_Ser-Thr 6.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2762 - - gmx:100781857 1544.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2027 1 46125630 46129246 Pvu7g2762 7 50655488 50659577 PCT