Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2759 ATGGCGACATATTTTCAAAGTAACCCCAAAATTCAGTCAGGTGCTGACGGCCTTCAAACTCTCGTACTAATGAACTCTGACTATGTCCAATACTCCGACGCGCCGCCGCCACACCACGGCGGAAACCACCTGTTTCTCAACTCCGCCGCCACCGTTGCCAACAACACCTCCCTGCTGAACCTCCCCCATGCGCCGTCCCCTCACACTCAGCAATTCGTCGGCGTGCCGCTCTCCGCCACAGCCCAGGAGCCGCCGCCGCCCATGCCCCACGACGTCTCCGCCCTGCATGGCTTCCTGCCGCGCATGCAGTACAACCTTTGGAACACAATTGACCCCAGCACGGCGGCGCGTGAGGTCCCACGCGCCTCTCAGGGACTGTCGCTCAGCCTGCACGGCGAGGAGGTGCTCCCATCGTCGTCCTCCGCTTCCGGGGCCTCCAACGGCGGCGGTGTGGTGGGGATTCAGAGTGTGCTCTTGAGTTCCAAGTACTTGAAGGCCACGCAAGAACTTCTGGACGAGGTTGTGAATGTTAACAGCGGAATTAAGATTGAACAAGCGAAGAAGAGCTTCGAGAAAACTAAGGTGGTTGGAGAATCATCAACCGCCGCCAGTGGTGACGGCGGAGAGGGAAGTGGGAAACGTAGCTCTGAATTGTCAACTACAGAGAGACAAGAAATTCAGATGAAGAAAGCAAAGCTGATCAACATGCTTGATGAGGTGGAGCAAAGGTACAGGCAGTACCACAACCAGATGCAGATTGTGACATCCTCGTTTGAGCAAGTTGCAGGGATTGGTTCTGCGAGGACGTACACTGCACTTGCATTGCAAACAATTTCAAAGCAATTTCGATGTTTGAAGGATGCAATAACAGGTCAAATCAGAGCTGCAAATAGGAGTTTGGGAGAAGAGGATTGTTTTGGGACTAAAGTTGAAGGTTCTAGGCTGAAATATGTGGACCATCATCTACGCCAACAGAGAGCTATTCAACAGTTAGGAATGATCCATCACAATGCTTGGAGACCCCAGAGAGGATTGCCAGAGAGATCGGTTTCTGTCTTACGTGCTTGGCTCTTTGAACACTTTCTCCACCCCTACCCCAAGGACTCCGACAAACACATGCTTGCAAAACAAACAGGGCTTACCAGGAGTCAGGTTTCAAATTGGTTCATAAATGCTCGAGTTCGGCTTTGGAAGCCAATGGTGGAGGAAATGTACTTGGAGGAGATGAAAGAACACGAACTAAACGGGTCTGAGGAGAAATCAAGCAAGAGTGGTGAAGATCCTGCGATGAAAAATTCAACTCCACGAGAGAAACATCCCACCTCTGAAATTGAATCAAAAAGTTTTAGTTCCAAACAAGATGTTTCTAAGAGTCAGAACAATTCAATGGCTTCAACTTCACCATCAACATCACCCATAGGGGGAAGAAATGTGAAGAATCAATTCAGTTTCATTGGGTCATCAACACAAGGAAGCCCCAAGAAAGCAAGGAACCATGAAATTCTACCCTCTCCAAATCGTGCTTCTTCAATGAACATGGATGTTAAAATGAATGAGGGCAACAATGAACAACAAGTTTCAATGGATGAGAGACAGAGTAGGGATGGGTACTCTTTCATGGGGAGCCAAACAAACTTCACTAGTGGTTTTGGACAATACCCAATGGAGGAAATTGGTAGGTTTGATGCTGAGCAATTCACACCAAGGTTTTCAGGTAATGGTGTTTCCCTCACTCTTGGTCTTCCTCATTGTGACACTTTGTCAGGAACACATCAAACTTTTCTCCCTAACCAAAACATTCAGCTAGGAAGAGGGTTGGACATTGGTCAACCAAATCAATTTGGTGTCTTAAACAATTCCACTTCTCACTCTTCAGCAGCATATGAGAGCATGAACATGCAGAACCCAAAGAGGTTTGCAGCACAATTGGTACTAGACTTTGTGGCCTAA 1950 0.4831 MATYFQSNPKIQSGADGLQTLVLMNSDYVQYSDAPPPHHGGNHLFLNSAATVANNTSLLNLPHAPSPHTQQFVGVPLSATAQEPPPPMPHDVSALHGFLPRMQYNLWNTIDPSTAAREVPRASQGLSLSLHGEEVLPSSSSASGASNGGGVVGIQSVLLSSKYLKATQELLDEVVNVNSGIKIEQAKKSFEKTKVVGESSTAASGDGGEGSGKRSSELSTTERQEIQMKKAKLINMLDEVEQRYRQYHNQMQIVTSSFEQVAGIGSARTYTALALQTISKQFRCLKDAITGQIRAANRSLGEEDCFGTKVEGSRLKYVDHHLRQQRAIQQLGMIHHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYLEEMKEHELNGSEEKSSKSGEDPAMKNSTPREKHPTSEIESKSFSSKQDVSKSQNNSMASTSPSTSPIGGRNVKNQFSFIGSSTQGSPKKARNHEILPSPNRASSMNMDVKMNEGNNEQQVSMDERQSRDGYSFMGSQTNFTSGFGQYPMEEIGRFDAEQFTPRFSGNGVSLTLGLPHCDTLSGTHQTFLPNQNIQLGRGLDIGQPNQFGVLNNSTSHSSAAYESMNMQNPKRFAAQLVLDFVA* 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2759 649 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 129 601 - -
Pvu7g2759 649 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 8 119 - -
Pvu7g2759 649 MobiDBLite consensus disorder prediction 194 223 - -
Pvu7g2759 649 MobiDBLite consensus disorder prediction 411 445 - -
Pvu7g2759 649 Pfam Associated with HOX 157 290 IPR006563 -
Pvu7g2759 649 SUPERFAMILY Homeodomain-like 340 406 IPR009057 -
Pvu7g2759 649 Pfam Homeobox KN domain 356 395 IPR008422 GO:0003677|GO:0006355
Pvu7g2759 649 Gene3D - 335 412 - -
Pvu7g2759 649 MobiDBLite consensus disorder prediction 411 512 - -
Pvu7g2759 649 SMART prehox3 152 291 IPR006563 -
Pvu7g2759 649 ProSiteProfiles 'Homeobox' domain profile. 336 399 IPR001356 GO:0003677
Pvu7g2759 649 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 5 8 119 - -
Pvu7g2759 649 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 5 129 601 - -
Pvu7g2759 649 MobiDBLite consensus disorder prediction 446 495 - -
Pvu7g2759 649 CDD homeodomain 339 400 IPR001356 GO:0003677
Pvu7g2759 649 Coils Coil 223 250 - -
Pvu7g2759 649 SMART HOX_1 339 403 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2759 Pvu-Chr7 50613221 50617719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2759 1 649 Homeobox Transcription Factor Family AT2G35940 48.901 1.16e-172 506
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Pvu7g2759 POX 8.7e-50 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2759 - - gmx:100810851 1072.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2759 7 50613221 50617719 Pvu7g2759 7 50613221 50617719 ECH
Pvu1g2030 1 46197344 46201848 Pvu7g2759 7 50613221 50617719 PCT