Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2683 ATGCAGGTCCCTTGGTTAGCCAAACATGAACTAGCAGCAAGCATGTTCATCATCTTATCTCTTACCAAAGTTACCAGCAGCCTTTATTTCAATTTCCCTTCCTTCCAACCACAGGATGAAGCAGATTTATTGCTAAACGGGAACTCAAAAATCTCCTTAGATGCCATTCAAGTGACCCCTGATATTCGTGGTCCTATCACAAACTATTCTGGCAGGGTCTTCTATAAAGAACAACTCAAGTTAAGGGACAGCCAAAGAGGCACGAAAACTTCATTCAATTCAACTTTTGTTTTCAACATTGCTGCTCAAACCTCTCCTGGTGGTGAGGGACTTGCTTTCATATTGACAGACGATACGTCTCTTCAACTTAACAGTGGAGGCCAATGGCTTGGTATTGTCAACTCAACAAGCACAGGGGTCACTAACATAGTTGCAGTGGAGTTCGATACAAGGAAAAGTTTCCTTGAAGATGGTGATGACAACCATGTTGGGGTGGATGTAAAGAACATCTATTCCACCAAACAAGAACCTCTTGGACCACATGGTGTTAATCTCTCTAGTGGCATGGATGTTGTTGCTACTGTTTACTTTGATGCTAATCATAACAAAATGACCATTTTTGTTTCTCCATCAGATTTGATGTCGAGCACACCAGTGCTAGTGGAGGATATTGATCTCTCCGAACATCTTCCAAATGATGTTTTTGTGGGATTTTCAGCTTCCACGGGAGAATATACCCAGCTTAACTCTGTAAGATCATGGTATTTCTCTAGCTGGAGGGATATTGAGAAGAATCCCAAAAAAAATCTGACATGGTTATGGATCTTGATTCCAATAGTTGGGGTTGGAGGAGTATGCGTGCTTGCTAGTGTGTGCTTTTGGAAAAGAAACCATATAAAGGGACAAGGGGTGGAGGAAGATATGAAAATAGAGCTTGAAATTAAAAGCTCTTCCAATGCGCCACACAAATTTCAGCTGAAGGAGCTTTTATCAGCCACAAGGAGTTTCCACTCATCAAACAAGCTTGGGAAAGGAGGATTCGGGATCGTTTATAAAGGCACCTTGAACGGCAAAGATGTTGCTGTGAAGAGGATTTCAAAGAATTCACGTCATGGTAAGCAAGATTTTATAGCAGAAATCACAACCATAGGGAATCTCAATCACAAAAATCTAGTGAAGTTAATAGGATGGTGCTACGAAAAGGGTGAGATCCTCCTTGTGTATGAGCTCATGCACAATAGGAGCTTAGACAGATTCATTTTTCCAACTTCTGGAGGCGATTCAACTCTGAATTGGGAAAAGAGGGTGGCTATTATATGTGGGGTTTCTCGGGCATTAGACTATCTTCACAACGGAAGTGATAAAAGAGTGCTGCATAGAGACATAAAACCAAGCAATGTGATGTTGGATTCAGAATTCAATGCTCGGCTTGGAGACTTTGGCTTGGCTCGCACCATTCATCTTAGTGAAAAATCTCACCACTCAACTAGAGAAATTGCTGGAACACCAGGGTATATGGCGCCAGAAAGCTTACACACCCAAAGGGCTTCAGTTGAAACTGATGTCTATGCATTTGGTATTCTGATGCTGGAAGTTGTGTGTGGGGGCAGAAAGGCTGAACACAAACAGGACCTTAGATGTTGTAACAGCATTGTGGAATGGGTTTGGGAGCTTCATGGCAGAGAAAGCATAACTGATGCTGTGGATTTGAGACTGAATGATGATTTTGATAAGGCTGAAGCCAAGTGTGTGCTTGAGTTAGGGTTAGCATGTTGCCATCCTAATCCACATGAGAGGCCATCAATGAGAACTGTGTTGCTGGTGCTAACAGGGGAAGCATCTCATCCCTTTGTAGCAGTTAAGCAACCTGCATTCACATGGCCAGCCACTGCTTCTGTTCTCAATGAAGGGTTCAATTTCCAAGTAACAGTATCCCAAAGTGAACCGATAACACAACTGAAAAGTGGGAGATGA 1974 0.425 MQVPWLAKHELAASMFIILSLTKVTSSLYFNFPSFQPQDEADLLLNGNSKISLDAIQVTPDIRGPITNYSGRVFYKEQLKLRDSQRGTKTSFNSTFVFNIAAQTSPGGEGLAFILTDDTSLQLNSGGQWLGIVNSTSTGVTNIVAVEFDTRKSFLEDGDDNHVGVDVKNIYSTKQEPLGPHGVNLSSGMDVVATVYFDANHNKMTIFVSPSDLMSSTPVLVEDIDLSEHLPNDVFVGFSASTGEYTQLNSVRSWYFSSWRDIEKNPKKNLTWLWILIPIVGVGGVCVLASVCFWKRNHIKGQGVEEDMKIELEIKSSSNAPHKFQLKELLSATRSFHSSNKLGKGGFGIVYKGTLNGKDVAVKRISKNSRHGKQDFIAEITTIGNLNHKNLVKLIGWCYEKGEILLVYELMHNRSLDRFIFPTSGGDSTLNWEKRVAIICGVSRALDYLHNGSDKRVLHRDIKPSNVMLDSEFNARLGDFGLARTIHLSEKSHHSTREIAGTPGYMAPESLHTQRASVETDVYAFGILMLEVVCGGRKAEHKQDLRCCNSIVEWVWELHGRESITDAVDLRLNDDFDKAEAKCVLELGLACCHPNPHERPSMRTVLLVLTGEASHPFVAVKQPAFTWPATASVLNEGFNFQVTVSQSEPITQLKSGR* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2683 657 CDD STKc_IRAK 342 611 - -
Pvu7g2683 657 ProSitePatterns Legume lectins beta-chain signature. 144 150 IPR019825 -
Pvu7g2683 657 PANTHER - 20 635 - -
Pvu7g2683 657 Pfam Legume lectin domain 28 266 IPR001220 GO:0030246
Pvu7g2683 657 CDD lectin_legume_LecRK_Arcelin_ConA 28 258 IPR001220 GO:0030246
Pvu7g2683 657 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.5-RELATED 20 635 - -
Pvu7g2683 657 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 259 IPR013320 -
Pvu7g2683 657 SMART serkin_6 336 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g2683 657 ProSiteProfiles Protein kinase domain profile. 336 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g2683 657 Gene3D Phosphorylase Kinase; domain 1 314 410 - -
Pvu7g2683 657 Pfam Protein kinase domain 336 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g2683 657 Gene3D Transferase(Phosphotransferase) domain 1 411 617 - -
Pvu7g2683 657 SUPERFAMILY Protein kinase-like (PK-like) 317 609 IPR011009 -
Pvu7g2683 657 ProSitePatterns Protein kinases ATP-binding region signature. 342 363 IPR017441 GO:0005524
Pvu7g2683 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
Pvu7g2683 657 Gene3D - 26 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2683 Pvu-Chr7 49835833 49838098 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2683 5 633 Receptor kinase-like Gene Family AT5G55830 34.985 1.04e-116 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pvu7g2683 Pkinase 1.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2683 - - tcc:108661882 725.317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2683 7 49835833 49838098 Pvu7g2683 7 49835833 49838098 ECH