Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2682 ATGAAACTACCTTGGTTTTTCAAATATCAATATGCAGCAATAGTCTTGGTTACCATTGCCCTTACCAAAGTTAGCTGTTTTCATTTCAATTTCTCTACCTTCCAAGAGGATGAGTCTGATATATGGCTGCACAAGAATTCAAATATATTCTTTGATGCAATCCAAGTAACCCCTGATATTGGTGGTCCTATACATAACTATGCTGGACGTGCTTTCTACACAAAGCCATACCAACTTTGGAACCAAAACCAAATAGCTTCCTTCAACACCACTTTTGTGCTCAGAATCACTCCACGGACTTCCCCTGGTGGTGAAGGTTTAGCCTTCATCTTAACTTCAGATAAGACTCTCCCAGAAAACAGTGATGGAGAATGGCTTGGTATTGTAAATGCTACTTCCAATGGAACTTTACAGGCTGGTATTCTAGCAGTGGAGTTTGACACAAGACACAGTTTCACAGAAGATGGCCCTGACAATCATCTTGGCATCAACATAAACAGCATCAACTCAATCCAAGAGGTTTCGTTAATAGACGCTGGGATCAATCTTTCGTCAGGTAAAGATGTCAAATTTCGCATTCAATACATTAATGACATAATATCGGTTTTTGGTGCCACGAATGGAACTTCTGAAGAATCTATGGAGACCCTCTTGGTAACTCCACCTCTTAATTTATCTTCCTTCCTTCAACAAGAGGTTTACTTTGGTTTCTCTGCCTCAACAAGTAACTACACCCAGCAGAACTGTGTAAGATCGTGGGAATTAAGTGGTGATGATATTAGAGATAATGACAAAAGTCTCTTGTGGGTTTATGTTACTGTTCCAACCGTGATTGTTTTTGTTATCATTGGTGGGTTGGTGATATTTTTCTTGCGCCGGAAAAAGAGTGGCCATGTGGAGGGGCCAGAAGATGCATTTCAAAGGATAGAGGATCAGATTCAATATTCCTCTATGGCTCCAAAGAAGTTTAGGCTAAAGGAAATAACAAAAGCAACTGGTGGATTCAGCCCTCAAAACAAGCTTGGACAAGGAGGGTTTGGAACTGTGTATAAGGGGCTATTGGAAAATAAGGAGGTAGCTGTAAAGAGAGTCTCCAAGAACTCACGCCAGGGGAAGCAAGAGTTTGTGGCAGAGGTGACAACAATTGGAAGCCTTCACCATAGAAATTTGGTGAAACTCACTGGTTGGTGCTATGAGAATAGAGAGTTCCTCCTTGTGTACGAGTTCATGCCTAATGGCAGCCTAGACAAGTACCTCTTTGGTGATTTTTTTTTTGGTAATTGTGGGCTTGAAGGAGGGTATTCTCTGACACTGAATTGGGAAACTAGGCACAGAGTGATACATGGGGTGGCTCAAGCACTTGACTACCTTCACAATGGGTGTGAGAAGAGAGTTCTCCACAGAGACGTCAAGGCCAGCAACATAATGTTGGACTCAGATTACAATGCCAAGTTGGGAGACTTTGGATTGGCTAGAACAATTGAGAAGAGAAATGAAACACATCACTCTACAAAAGAGATTGCAGGCACACCCGGGTACATGGCCCCTGAAACCTTTCTGACTGGAAGAGCAACAGTGGAGACAGATGTGTATGCATTTGGGGTTCTTGTGTTGGAAGTAGTGTGTGGAAAGAGGCCAGGGAATGTGTATGCACAAGATGACTACAAGAACAGCATTGTGTATTGGGTGTGGGATTTGCATGGGAAGGGAAAAGTGGTTCGTGGTGTTGATGGAAGGTTGAAGAAGGAGGAGATTAAGGAGGAGGAGGTGGAGTGTGTTCTTGTTCTTGGCTTGGCTTGTTGCCATCCAAACCCACATCAAAGGCCATCCATGAGAACTGTCCTTCAGGTTCTGAATGGGGAAGCACCACCACCTGAAGTGGCTAAAGAAAGACCAGTTTTTATGTGGCCTGCTATGCCTCCATCCTTCAAAGATGCTAAAGATAGCTCCCTCATCCAGGGAACACTTCTCACTGAGATCATTGGAAGATGA 1992 0.4317 MKLPWFFKYQYAAIVLVTIALTKVSCFHFNFSTFQEDESDIWLHKNSNIFFDAIQVTPDIGGPIHNYAGRAFYTKPYQLWNQNQIASFNTTFVLRITPRTSPGGEGLAFILTSDKTLPENSDGEWLGIVNATSNGTLQAGILAVEFDTRHSFTEDGPDNHLGININSINSIQEVSLIDAGINLSSGKDVKFRIQYINDIISVFGATNGTSEESMETLLVTPPLNLSSFLQQEVYFGFSASTSNYTQQNCVRSWELSGDDIRDNDKSLLWVYVTVPTVIVFVIIGGLVIFFLRRKKSGHVEGPEDAFQRIEDQIQYSSMAPKKFRLKEITKATGGFSPQNKLGQGGFGTVYKGLLENKEVAVKRVSKNSRQGKQEFVAEVTTIGSLHHRNLVKLTGWCYENREFLLVYEFMPNGSLDKYLFGDFFFGNCGLEGGYSLTLNWETRHRVIHGVAQALDYLHNGCEKRVLHRDVKASNIMLDSDYNAKLGDFGLARTIEKRNETHHSTKEIAGTPGYMAPETFLTGRATVETDVYAFGVLVLEVVCGKRPGNVYAQDDYKNSIVYWVWDLHGKGKVVRGVDGRLKKEEIKEEEVECVLVLGLACCHPNPHQRPSMRTVLQVLNGEAPPPEVAKERPVFMWPAMPPSFKDAKDSSLIQGTLLTEIIGR* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2682 663 PANTHER - 13 653 - -
Pvu7g2682 663 Pfam Protein kinase domain 338 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g2682 663 ProSitePatterns Protein kinases ATP-binding region signature. 341 362 IPR017441 GO:0005524
Pvu7g2682 663 Gene3D Phosphorylase Kinase; domain 1 320 409 - -
Pvu7g2682 663 SMART serkin_6 335 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g2682 663 Gene3D Transferase(Phosphotransferase) domain 1 410 625 - -
Pvu7g2682 663 Gene3D - 25 267 - -
Pvu7g2682 663 SUPERFAMILY Protein kinase-like (PK-like) 316 618 IPR011009 -
Pvu7g2682 663 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 13 653 - -
Pvu7g2682 663 ProSiteProfiles Protein kinase domain profile. 335 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g2682 663 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 256 IPR013320 -
Pvu7g2682 663 Pfam Legume lectin domain 28 264 IPR001220 GO:0030246
Pvu7g2682 663 CDD lectin_legume_LecRK_Arcelin_ConA 27 256 IPR001220 GO:0030246
Pvu7g2682 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Pvu7g2682 663 CDD STKc_IRAK 341 620 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2682 Pvu-Chr7 49829710 49831701 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2682 19 633 Receptor kinase-like Gene Family AT5G10530 37.736 1.00e-120 372
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pvu7g2682 Pkinase 2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2682 - - pvu:PHAVU_007G260300g 1180.24