Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2663 ATGAACGAGTACAAGATTGACTGTGTTGGACGGATTCAACAAAGCTATGCTCTAAATGGGGATTTGAGTTCAGAGTTTAGCAATTGTTCTAGTCAATATTTTGATATTATACAGGCTTCAAATATGGGAACTTTCAATCAGCCACTTGCTATGGTGAGTGGTGAAGGAGTGGAACAGGAACCACACATAGGCCAAACCAAATCATCTAGCAGCATTATCAGCCGTTTTGAGTCACCAGCTTCAGCCTTTTATGCAACAGAAATCTGCATGGGTTTCCCACAATATGATAGATTAGTTGGTAACCCCTCTCTGATATCTCAATTCTCTAAGATCAGTGATGTGGAATTCCCTTTGTATCAATCTCCCAGGCAAAACCTTTTCTTGGCTTCATTGGCAAACCAACCTGCTCCAAACTTCGAGTTGTCAAATCCCTTGCAAGCAATGCTCTTATCCCATTTGAATGGTGATCAATGTGTTAGATCTCCTGAAAAATCTAATAAAATCCCATGTGGGAATTTCCCTGGCAGCAGTTTTCTTCCAATTGAACAACTCAAGTTGTTCATTGATGATGCTGCAAGCCCTTCAATTCCTTCTAAAGGAAATCAGGATCAAACAGATTCTTGTGGCTCATACAATTTACCTGCTGCACAGATTAGCTTCTCTTCTCAGCAAGAGATGCTGTCACCACCACTCTCAGCAGGTAGCTTGTTAACTTCTTCTGGAAACTCTACTTCAAATGGACCAGTAAGTAAAACAAGAATAAGATGGACTCAGGAACTTCACGAGCAGTTTGTTGAGTGTGTGAATCGCCTTGGAGGTGCTGAGAAAGCAACGCCAAAAGCTATATTAAGGCTGATGGAATCAGATGGATTGACCATCTTCCATGTTAAAAGTCATTTGCAGAAATATAGAATTGCCAAATACATGCCACAATCAACTCAAGGGAAATCTGAGAAAAGAATCAATGTAGAGAATGTGCATCTTGATGCCAAAACTGGATTGCAAATTAGAGAGGCACTTCAGTTGCAGCTAGATGTTCAGAGACGCCTTCATGAACAACTAGAGATTCAGAGAAAATTACAGTTGAGGATTGAGGAGCAAGGTAAGCAGCTGAAAATGATGTTTGACGAGCAGCAGAAGACAAGTGATAGCAACTTGAGTACTCAGAATTTGGGAAATACAACTAATAATGACAGAACTATTAGTTCTAAAGATGTTCAGGTTTCCATTTCTGAAGGGTCTGAAAAATTCCTCATTCCTTCCAACATAACTTAG 1275 0.4008 MNEYKIDCVGRIQQSYALNGDLSSEFSNCSSQYFDIIQASNMGTFNQPLAMVSGEGVEQEPHIGQTKSSSSIISRFESPASAFYATEICMGFPQYDRLVGNPSLISQFSKISDVEFPLYQSPRQNLFLASLANQPAPNFELSNPLQAMLLSHLNGDQCVRSPEKSNKIPCGNFPGSSFLPIEQLKLFIDDAASPSIPSKGNQDQTDSCGSYNLPAAQISFSSQQEMLSPPLSAGSLLTSSGNSTSNGPVSKTRIRWTQELHEQFVECVNRLGGAEKATPKAILRLMESDGLTIFHVKSHLQKYRIAKYMPQSTQGKSEKRINVENVHLDAKTGLQIREALQLQLDVQRRLHEQLEIQRKLQLRIEEQGKQLKMMFDEQQKTSDSNLSTQNLGNTTNNDRTISSKDVQVSISEGSEKFLIPSNIT* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2663 424 MobiDBLite consensus disorder prediction 229 250 - -
Pvu7g2663 424 SUPERFAMILY Homeodomain-like 249 305 IPR009057 -
Pvu7g2663 424 Pfam MYB-CC type transfactor, LHEQLE motif 334 381 IPR025756 -
Pvu7g2663 424 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 250 308 IPR017930 -
Pvu7g2663 424 Gene3D - 250 309 - -
Pvu7g2663 424 Coils Coil 337 357 - -
Pvu7g2663 424 Pfam Myb-like DNA-binding domain 255 304 IPR001005 -
Pvu7g2663 424 MobiDBLite consensus disorder prediction 376 399 - -
Pvu7g2663 424 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 51 422 IPR044848 GO:0003700
Pvu7g2663 424 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 51 422 - -
Pvu7g2663 424 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 251 306 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2663 Pvu-Chr7 49660224 49663519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2663 239 378 G2-like Transcription Factor Family AT4G28610 59.441 1.46e-50 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pvu7g2663 Myb_DNA-binding 5.6e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2663 - - gmx:102668541 631.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2663 7 49660224 49663519 Pvu7g2663 7 49660224 49663519 ECH