Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2653 ATGAGAGAGAAAGGTGTAAAAAGAAGAGAGAAAAGAAGCTATTCATCCAGAATTCATAACCGACTCCTTCTCTCTCTCTTGGGAAATGGTTTTAAGAGGCATAAAGAGAAGGCGGTTTCACCATTAATGGGGTTCTCCATAGCTATTGAATTAGAAGCAGCACAAGAACAAGAACAAGAGCAAGAGACAAAGTTTTTAAGCTCCTCTCTGAATATCATGGCTTCCTCAAGTGTCAAGAGCACCAACTCAACAACTCAACTTGAACCACTCCCCCAACATCTTCATCATCAACAACCACCACATCATTTTCATCATCATCAAATACCAGACCAAGAAATCTCTTTCGGGATGATGCCATCTTCCTCATCACACTCTATCCCTGCAAATTACTTAAGCAAAGATTCTGGAGCTTATGATTTGGGAGAATTGGATCAAGCCTTTTTTTTGTATCTTGACGACCCTTCTAGTGTTCAAGACCAAAGACAGAACTCATCATCAGGAATGAGGCCACCACCAACTCTCAATATTTTCCCATCTCAGCCTATGCACGCAGTGCCACCATCCAATTCCAAGGTTACCATGGAATTACCCTCCACACAAACCAGTGGCTCCAAGAGACCACCAGGGTCATCCATAGCCAAGCCCAACCCTCACACTGAAGCTCCCTCTGCACCTGAACCACCCAAAGTTGTAAAGCGAGAGGGAAATCGAAAGGGAGCAACCTCAAGTTCTGAACAGGAGGCACCCAAAACACCAGATCCTAAGACACTGAGAAGACTTGCTCAGAATAGAGAAGCAGCAAGAAAAAGCAGGCTGAGGAAAAAGGCGTACGTTCAGCAGCTAGAGTCAAGTAGGATTAAGCTTAATCAGCTAGAACAAGAGTTACAGCGTGCAAGAGCTCAAGGCATATTAATGGGTGGAAATGCCCTTCTGGGAGGTGAACAAGGCTTTCCTATGGCTATGAATGGCATTAGCTCAGAGGCTGCAATGTTTGACGTGGAATATGCGAGATGGTTAGAGGAGCACCAGCGCATAGTGTGTGAGCTAAGAGGTGCAGTGCAAGAACACCTCCATGAAAACGAGCTTCGGTTATATGTGGACAATTGTTTGGCTCACTACGACCAAGTAATGAACCTCAAGACCATAGTGGCCAAAACAGACGTATTCCACCTTGTTTTTGGCATGTGGAAGACCCCAGCTGAACGTTGCTTTATGTGGATTGGTGGCTTCAGACCCTCTGAACTCATCAAGATTATTCTGGGTCAAATTGAGCCTCTTACGGAGCAACAAATACTTGGGATATGTGGGTTGCAACAATCTACACAAGAGGCAGAAGAGGCTCTTTCACAAGGGCTTGATGCCCTAAACCAATCTCTCTCAGACACTATAACATCAGACTCTTTGTGGTGTCCTCCAAACATGACCAACTACATGGGACAGATGGCTGTGGCAATGAACAAACTCTCCACTCTTGAAAGTTTTGCAAGACAGGTACGTATATTTTGTGGTAACTTTTTGAAAGAGTGCATGTATGAATCTTCTTTACATAAAATAACAACGAATGAATGCATGTTGAATATGTGGTTGATGTAA 1593 0.4394 MREKGVKRREKRSYSSRIHNRLLLSLLGNGFKRHKEKAVSPLMGFSIAIELEAAQEQEQEQETKFLSSSLNIMASSSVKSTNSTTQLEPLPQHLHHQQPPHHFHHHQIPDQEISFGMMPSSSSHSIPANYLSKDSGAYDLGELDQAFFLYLDDPSSVQDQRQNSSSGMRPPPTLNIFPSQPMHAVPPSNSKVTMELPSTQTSGSKRPPGSSIAKPNPHTEAPSAPEPPKVVKREGNRKGATSSSEQEAPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLNQLEQELQRARAQGILMGGNALLGGEQGFPMAMNGISSEAAMFDVEYARWLEEHQRIVCELRGAVQEHLHENELRLYVDNCLAHYDQVMNLKTIVAKTDVFHLVFGMWKTPAERCFMWIGGFRPSELIKIILGQIEPLTEQQILGICGLQQSTQEAEEALSQGLDALNQSLSDTITSDSLWCPPNMTNYMGQMAVAMNKLSTLESFARQVRIFCGNFLKECMYESSLHKITTNECMLNMWLM* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2653 530 Pfam Seed dormancy control 346 419 IPR025422 GO:0006351|GO:0043565
Pvu7g2653 530 MobiDBLite consensus disorder prediction 156 258 - -
Pvu7g2653 530 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 253 297 IPR004827 GO:0003700|GO:0006355
Pvu7g2653 530 Gene3D - 254 304 - -
Pvu7g2653 530 Coils Coil 274 301 - -
Pvu7g2653 530 PANTHER BZIP TRANSCRIPTION FACTOR TGA10 139 498 - -
Pvu7g2653 530 MobiDBLite consensus disorder prediction 156 173 - -
Pvu7g2653 530 PANTHER TRANSCRIPTION FACTOR TGA9 139 498 - -
Pvu7g2653 530 ProSiteProfiles DOG1 domain profile. 328 530 IPR025422 GO:0006351|GO:0043565
Pvu7g2653 530 SMART brlzneu 251 317 IPR004827 GO:0003700|GO:0006355
Pvu7g2653 530 Pfam bZIP transcription factor 255 293 IPR004827 GO:0003700|GO:0006355
Pvu7g2653 530 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 258 273 IPR004827 GO:0003700|GO:0006355
Pvu7g2653 530 SUPERFAMILY Leucine zipper domain 255 297 IPR046347 GO:0003700|GO:0006355
Pvu7g2653 530 MobiDBLite consensus disorder prediction 182 209 - -
Pvu7g2653 530 CDD bZIP_HBP1b-like 255 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2653 Pvu-Chr7 49576913 49581561 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2653 128 498 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 60.152 2.63e-157 454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pvu7g2653 DOG1 9.9e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2653 K14431 - gmx:100800059 758.059
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1458 1 38819114 38826230 Pvu7g2653 7 49576913 49581561 PCT