Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2640 ATGGAGTCTCACGATGAAACAGGATGCCAGGCTCCAGAAAGGCCAATTCTTTGCACTAACAATTGTGGCTTCTTTGGAAGGGCTGCCACCATGAATATGTGCTCCAAATGTTACAAAGACACGCTGTTAAAGCAGGAACAAGACAAACTTGCAGCAGCCTCGGTTGAAAACATTGTGAATGGCGGTTCGGGCTGCAGCGGGAAACAGGCCGTGACTGCAGGTTCCGTGGATGTACAAGTTGGAAATGTGGAGATGAAGACAGTCTCTGCTGAGATTTCTGGAGATTCATCCTCTGGTCAGAATTTGGAGATGAAAGCTAAGACAGGTCCCAGCAGATGTGCTACTTGCCGGAAGCGTGTTGGATTAACCGGTTTCAGCTGCAAATGTGGGAACCTCTTTTGTGCAATGCACCGCTATTCTGACAAACACGATTGCCCCTTTGATTATCAGACTGTTGGTCGTGAGGCTATAGCCAAAGCCAACCCTGCAATTAAGGCTGACAAGCTTGATAAAATCTAG 519 0.4759 MESHDETGCQAPERPILCTNNCGFFGRAATMNMCSKCYKDTLLKQEQDKLAAASVENIVNGGSGCSGKQAVTAGSVDVQVGNVEMKTVSAEISGDSSSGQNLEMKAKTGPSRCATCRKRVGLTGFSCKCGNLFCAMHRYSDKHDCPFDYQTVGREAIAKANPAIKADKLDKI* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2640 172 Pfam AN1-like Zinc finger 113 150 IPR000058 GO:0008270
Pvu7g2640 172 SMART A20_3 15 39 IPR002653 GO:0003677|GO:0008270
Pvu7g2640 172 ProSiteProfiles Zinc finger AN1-type profile. 107 153 IPR000058 GO:0008270
Pvu7g2640 172 SMART AN1_Zf_4 113 150 IPR000058 GO:0008270
Pvu7g2640 172 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 8 2 172 - -
Pvu7g2640 172 PANTHER AN1-TYPE ZINC FINGER PROTEIN 2 172 - -
Pvu7g2640 172 Gene3D - 87 168 IPR035896 -
Pvu7g2640 172 Gene3D - 1 60 - -
Pvu7g2640 172 Pfam A20-like zinc finger 16 39 IPR002653 GO:0003677|GO:0008270
Pvu7g2640 172 SUPERFAMILY AN1-like Zinc finger 104 167 IPR035896 -
Pvu7g2640 172 ProSiteProfiles Zinc finger A20-type profile. 12 46 IPR002653 GO:0003677|GO:0008270
Pvu7g2640 172 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 17 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2640 Pvu-Chr7 49454306 49456212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2640 5 172 C2H2 Transcription Factor Family AT3G52800 42.442 9.80e-40 130
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2640 7 49454306 49456212 Pvu7g2640 7 49454306 49456212 ECH
Pvu7g2640 7 49454306 49456212 Pvu11g0597 11 5024589 5026511 ECH