Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2634 ATGGAGAGTAGTGCCAAGGTGGAAGACTATGAAGTGATTCGGCAAATTGGAAGAGGAGCACTTGGTGCAACTTTTCTTGTTCTACACAAGACTGAGAAAAAGAGGTATGTGCTGAAGAAAATTCGCTTGTCCAAACAAGCTGACAAATCCAAAGTGACAGCACAACAAGAGATGGACCTGATAGCTAAACTAAATTACCCTTATATTGTGGAGTACAAAGATGCTTGGGTGGAGAAGGAGGATTACATATGCATTATAACCGGCTATTGCGAAGGAGGTGACATGGCTGCGAACATAAAGAAAGTTCGGGGATCTTATTTTTCGGAGGAGAAAGTCTGCAAATGGTTGACTCAGTTGTTACTAGCTGTGGACTATCTTCACTCCAATCGCGTACTCCACAGAGATGTTAAGTGTTCCAACATATTCCTTACCAAAGAAAATAACATTCGATTAGGTGAATTTGGTCTTGCGAAGCTTCTCAATACTGAAGATCTCACTTCTCCGGTTTTTGGAACTCTAAACTACATGTGTCCTGAGGCATTTGCTGGTATGCCTTACGGTTATAAATCTGATATGTGGTCACTTGGTTGCTGCATGTTTGAAATTGTTGCACATCAACTTGCATTTCGTGCTCCAGACAGGGCTGGACTTATCAACAAAATAAATAGATGCTCCATTTCTCCACTACCAATTGTTTACTCGTCCACACTGAAACAACTTATCAAGAGCATGCTGAGGAAAAACCCAGAACACAGACCAACAGCATCTGAATTATTAAGGCATCCTCATTTACAACCTTATGTTCTACGCTGTCATAATGCTTCATCTATTTATCTACCAGTACATCTTATAAATAGTAACTCCCCAAAGGATAAAACTAAAAATAAATCTAGTGGTAGCAAAGATCATTGGGACAAGGAAGCAAGATTGGCTGGATTAGTAAATCGTTTGGACCGAATTTATTCATTTGAGGGAAATGTAGATGTACAGACACGGAACCAGCATAATGAGGGCAAGGTAGCAGTGCCAACCAAAGACAACCTTGAGACCAAAATGGTTGATTCTACCAGCTACACTCTGGAATTTTCTACAAGTATTAGTGGCTCGAAAGATGGCTCTACAACATCTGAATCAACCGTTTGCAGTGTGAGCAAGGAAGGAGACTTTAAAAATAGACTTGCAAGGGACATAGCTGACAGTGAGATCACTTCAAAAAGTACAATAGATTGTGTGCATGAAGAAGAAGGGCTTACTACCCTTAAGTCATACGCGATTGACATAAATACAGTAATTAAAAATGTTGAAGATACTTTTTCCAATGAAGATCTCAATGCAGATGAAGCACTGAGTGAAGGTGCCAAACCTGGGGATTCCAGTAAATCCACAATGTCCAGTGAAGGCAGCAACGGTAATGATAAAGATGAGTCCATTGATGAGATCATGTCAAAGAGTACCCTTGTTTCTGTGCATGAAGAGCAAGGATTTATGACGGATCATTTTCAGAAGTCAGATGTGATTGACCGAAGCTCAATATCTACAGAAGTTGAAGATAATTTTTCCAATGAAGGTTTTCATAAAATGGAAGCAGAGAGGGAGAATGCCATACCTGAGGACTCCAGAAAATCAATAGTGTTCATTGAAAACGGTGAAGGTAATGATAATGACGGGTCCATTGATGAGATCACTTCAAAGAGTATTCTAGAATCTGTGCATGGTGAACAAGAATTTACTGCTGAACATTTTCCAGAGTCAGATGTGATTGACACAAATGCAGTGGCTACAACAGTTGAAGATAATTTTTGCAATGAAGCATTGGACCAAACTGAAACAGAGAGAAAAACTGGCAGACATGAGGACTCGAGAATATCAGTAGTATCCAATGAAAACAGTGATGCTGATGGTACTGATAGTTCCATTAATGAGATCAGCTTGAAGAGTACAATCGGTTATGTGCAAGAAGAGCAATGGTTTATAGCTGAACATGTTCAAAAGTTAGATGTTGTTGAAGTAGAAGCTGCGGCTTCCATAGATGTGGGCGAAATTTCTAGTGAAGGTTTTGATAAAGCTGAAACACATAGGGAAGATGCCAAACTTGAGTGCCCAAGTGAATCAATAATTTCCTATGATAAGAGCAATGGTAATGATGAAGATGAATCCGGTGGTGAGATCACATCAAAGAGTATGCTAGAATCTGTAGGTGAAGAACAAGGACTCACTGCTGAGCATTTTCAGACATCTGATGCAAATGACATAAATGCAGTGACTACAGAAGTTGAAGATAAACTTCCCAATGAAGGTTTTGATACAGCTGAAACACAGGAGAAAGATGCTAAAACTGAGGATTCCATTAAATCTTTGTCCAATGAAGAAGGTGGTGGCGGCAGCAGCAGCAGTGGTGATAACGATGGATCTATTGACGAGGAAGGGTCATCATCCCCAATGGCACAACCTGTTAAGGTTGAACATGACACTGAAACTGGAAGCAGCTTGAAGGAAAATGAAAACCCTGAAGCATTTAAAGAAGGCTCACGCATGGACAGCTTGACTCTTGATAGTAAGGATGAAAACAGAGAAGAGACACATACAATCAGTTGCTCAACGTGTAAAGAAGACAACAATGGTGTTGTGTCTCATAAGCCAGCAAATGGCATTTCAGTAATGAAGCGTATTTCAAGAGGCAGCACTACTTCCTGCCTGCAAAGAGCTGAAGCTCTGGAATCTCTACTTGAGTTATGTGCACAGCTACTTCAGCAAGGAAACCTTGAAGAGCTTGCTGCTGTGCTAAGACCATTTGGAGAAGATGCCGTATCTGTGTCATCCAGAGAAACAGCAATATTGCTTACCAAAAGCCTCATGGCCTCACAAAAACTTAATCCTGAAACGTAG 2886 0.4047 MESSAKVEDYEVIRQIGRGALGATFLVLHKTEKKRYVLKKIRLSKQADKSKVTAQQEMDLIAKLNYPYIVEYKDAWVEKEDYICIITGYCEGGDMAANIKKVRGSYFSEEKVCKWLTQLLLAVDYLHSNRVLHRDVKCSNIFLTKENNIRLGEFGLAKLLNTEDLTSPVFGTLNYMCPEAFAGMPYGYKSDMWSLGCCMFEIVAHQLAFRAPDRAGLINKINRCSISPLPIVYSSTLKQLIKSMLRKNPEHRPTASELLRHPHLQPYVLRCHNASSIYLPVHLINSNSPKDKTKNKSSGSKDHWDKEARLAGLVNRLDRIYSFEGNVDVQTRNQHNEGKVAVPTKDNLETKMVDSTSYTLEFSTSISGSKDGSTTSESTVCSVSKEGDFKNRLARDIADSEITSKSTIDCVHEEEGLTTLKSYAIDINTVIKNVEDTFSNEDLNADEALSEGAKPGDSSKSTMSSEGSNGNDKDESIDEIMSKSTLVSVHEEQGFMTDHFQKSDVIDRSSISTEVEDNFSNEGFHKMEAERENAIPEDSRKSIVFIENGEGNDNDGSIDEITSKSILESVHGEQEFTAEHFPESDVIDTNAVATTVEDNFCNEALDQTETERKTGRHEDSRISVVSNENSDADGTDSSINEISLKSTIGYVQEEQWFIAEHVQKLDVVEVEAAASIDVGEISSEGFDKAETHREDAKLECPSESIISYDKSNGNDEDESGGEITSKSMLESVGEEQGLTAEHFQTSDANDINAVTTEVEDKLPNEGFDTAETQEKDAKTEDSIKSLSNEEGGGGSSSSGDNDGSIDEEGSSSPMAQPVKVEHDTETGSSLKENENPEAFKEGSRMDSLTLDSKDENREETHTISCSTCKEDNNGVVSHKPANGISVMKRISRGSTTSCLQRAEALESLLELCAQLLQQGNLEELAAVLRPFGEDAVSVSSRETAILLTKSLMASQKLNPET* 962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2634 961 MobiDBLite consensus disorder prediction 724 753 - -
Pvu7g2634 961 Pfam Protein kinase domain 10 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g2634 961 ProSiteProfiles Protein kinase domain profile. 10 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g2634 961 MobiDBLite consensus disorder prediction 447 477 - -
Pvu7g2634 961 SUPERFAMILY Protein kinase-like (PK-like) 7 284 IPR011009 -
Pvu7g2634 961 SMART serkin_6 10 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g2634 961 Gene3D Transferase(Phosphotransferase) domain 1 92 315 - -
Pvu7g2634 961 MobiDBLite consensus disorder prediction 786 811 - -
Pvu7g2634 961 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 5 510 - -
Pvu7g2634 961 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 514 591 - -
Pvu7g2634 961 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 681 750 - -
Pvu7g2634 961 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 808 947 - -
Pvu7g2634 961 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 587 674 - -
Pvu7g2634 961 MobiDBLite consensus disorder prediction 605 624 - -
Pvu7g2634 961 MobiDBLite consensus disorder prediction 761 785 - -
Pvu7g2634 961 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 5 510 - -
Pvu7g2634 961 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 587 674 - -
Pvu7g2634 961 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 808 947 - -
Pvu7g2634 961 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 681 750 - -
Pvu7g2634 961 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 514 591 - -
Pvu7g2634 961 MobiDBLite consensus disorder prediction 455 470 - -
Pvu7g2634 961 Gene3D Phosphorylase Kinase; domain 1 1 89 - -
Pvu7g2634 961 MobiDBLite consensus disorder prediction 703 858 - -
Pvu7g2634 961 CDD STKc_Nek 9 264 - -
Pvu7g2634 961 MobiDBLite consensus disorder prediction 824 858 - -
Pvu7g2634 961 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
Pvu7g2634 961 MobiDBLite consensus disorder prediction 605 638 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2634 Pvu-Chr7 49415618 49423145 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2634 16 293 MAP Kinase Kinase Kinase AT1G09000 29.236 1.11e-30 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Pvu7g2634 Pkinase 1.1e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2634 K08857 - gmx:100818558 1174.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2634 7 49415618 49423145 Pvu7g2634 7 49415618 49423145 ECH
Pvu1g1425 1 38380309 38387020 Pvu7g2634 7 49415618 49423145 PCT