Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2626 ATGGAGGGCTGCAAAAACTCCCCTCTAAAACCATGGAAGAAAGGGCCAACAAGGGGCAAAGGTGGTCCCCAAAATGCCTCATGTGAGTATAGAGGTGTTAGGCAGAGAACATGGGGCAAATGGGTGGCTGAGATAAGAGAGCCTAAGAAGAGATCAAGACTCTGGCTTGGCTCCTTTGCCACAGCAGAAGAAGCTGCCTTGGCCTATGATGAGGCTGCAAGGAGACTCTATGGTCCTGATGCTTACCTCAACCTCCCCCACATGCAACCAAACCTCATAAACTCCACCACCAGATCTCAAAAGTTCAAGTGGTTCCCTTCCAAGAACTTCATCTCCATGTTCCCTTCACGTGGATTGCTCAACCTCAATGCTCAACCGAGTGTCCATGTCATCCACCAGAGGCTGCAACAGCTTAAGCAAAAAGGGGTGGTTGCAACAACAACAACAACTCAACCACCACATTCTACTCATCCAAGGGTGGCAGAACTTGAGAACTTAGTCAGCCAAAACCACTCAGAGACTCTGCCTCCACTTCCCCAAGATTCTCAAGTTTCACCACCAAAAATAATTGGTGATTCTGAGGAGAAACCCGAGATAGACCTGCTTGAGTTTCTTCAACAGATGGGAATACTAAAAGATGAAAGAGAGACAGAGAAAACTGATAGCTCGGGAAGCTCAACAGTGTCTGAAGCTGCATCAAGAGATGAAAATGAACAAGCAGGAGTGTTTTCTGACATGAGTAGTGTTAACTGGGAGGAATTGATTGAGATGCATGACCATGAAGTTGTGTGTAACTATCTTGCATCAGAAGAAATCCAGTTTGAAGCATATGACATAAACGAGGACCTTACTTTCTCCACTTCCATTTGGAACAACTAA 879 0.4585 MEGCKNSPLKPWKKGPTRGKGGPQNASCEYRGVRQRTWGKWVAEIREPKKRSRLWLGSFATAEEAALAYDEAARRLYGPDAYLNLPHMQPNLINSTTRSQKFKWFPSKNFISMFPSRGLLNLNAQPSVHVIHQRLQQLKQKGVVATTTTTQPPHSTHPRVAELENLVSQNHSETLPPLPQDSQVSPPKIIGDSEEKPEIDLLEFLQQMGILKDERETEKTDSSGSSTVSEAASRDENEQAGVFSDMSSVNWEELIEMHDHEVVCNYLASEEIQFEAYDINEDLTFSTSIWNN* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2626 292 SUPERFAMILY DNA-binding domain 29 87 IPR016177 GO:0003677
Pvu7g2626 292 Gene3D AP2/ERF domain 29 87 IPR036955 GO:0003700|GO:0006355
Pvu7g2626 292 CDD AP2 28 87 IPR001471 GO:0003700|GO:0006355
Pvu7g2626 292 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 1 289 - -
Pvu7g2626 292 MobiDBLite consensus disorder prediction 1 27 - -
Pvu7g2626 292 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2F 1 289 - -
Pvu7g2626 292 MobiDBLite consensus disorder prediction 222 243 - -
Pvu7g2626 292 MobiDBLite consensus disorder prediction 213 243 - -
Pvu7g2626 292 PRINTS Ethylene responsive element binding protein signature 30 41 IPR001471 GO:0003700|GO:0006355
Pvu7g2626 292 PRINTS Ethylene responsive element binding protein signature 52 68 IPR001471 GO:0003700|GO:0006355
Pvu7g2626 292 Pfam AP2 domain 28 78 IPR001471 GO:0003700|GO:0006355
Pvu7g2626 292 ProSiteProfiles AP2/ERF domain profile. 29 86 IPR001471 GO:0003700|GO:0006355
Pvu7g2626 292 SMART rav1_2 29 92 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2626 Pvu-Chr7 49321858 49323149 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2626 5 291 AP2-EREBP Transcription Factor Family AT3G57600 51.203 3.88e-92 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pvu7g2626 AP2 2.9e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2626 - - gmx:100808363 434.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2626 7 49321858 49323149 Pvu7g2626 7 49321858 49323149 ECH
Pvu1g1416 1 38195399 38196241 Pvu7g2626 7 49321858 49323149 PCT