Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2624 ATGGCCGAATCACTTATTTTCAGCTTCGCAGAATCACTCATAGGGAAGATTGCTTCTCGTGCAGTTGAAGAAGCTTCCTTGGCGGTTGGTGTGCATAGCGAGCTACAACAGATGAAAGCAACTATGGCACTCATCAGAGGTGTGCTCTTAGATGCTCAGCAAAAGAATCCGCTGAGCAGTGCATTGACCGAATGGCTGAGACAGGTGAAGCACGTGTTTTCTGATGCTGAAGACATAGTTGATGATTTTCAATGCGAAGCCTTGAGGAAGCACGTTGTCAACACCTATGGTAGCTGCTCAAGGAAGGTACGTCGTTTCTTCTCAACAAGTAGTCCTCTTGTTTATCGTCTTAGAATGGCGCATCGCATTCAAGATATCAACACCATGTTGGCCAAACTTGGAGATCAAAGAAGCATGTTTGGCCTTCAAATCATTGACCAAGATACACATGTCGTGCACGTGAGGGAAACGACTCATTCTTATGTAAACCCTTCCAATGTTACAGGAAGGGAACATGACAAAAATGAAATAGTAAAACTTTTGGTGCAAGATGGTCATCACCAAAGTCTTTCTGTTATTCCCATTGTGGGAATGGGAGGCTTGGGAAAAACCACACTTGCTAAGTTGGTCTTCAATGACACCAACATTGATGCATGTTTTCCCTTGAAGATGTGGGTGTGTGTCTCTAATGATTTTGAACTTAGGAATGTGCTCATTAAAATCCTCAGTTCTGCTATAAACCCAACTAGGGAAAACTTCAATAACTTTGAGACAGAGCAACTTCAAAATCGTTTGAGAAATACAATTCAAGGTCAGAAGTTCTTGCTTGTGTTGGATGACGTGTGGAACGAGGATGGTGCAAGATGGGATGAGTTGAAGGAAATAATAGATGTAGGTGTTGAAGGGTGTAAGATCTTAGTGACCACTCGTAGCCACTTGACAGCTACCATGATGTGCACCAAATCCTCCAACTCTTACCTTCTGGAACGCCTTTCTGAAGAGGATTCCTTCTCTCTGTTTGTGAAAACGGCTTTTAAAGAAGGGAAAGAGAAAAGCTTTCCACAGTTGTTGGAGATTGGGAAAGAAATTGTGAACAAGTGTGGAGGAATACCGTTGGCAGTGAAAACTTTAGCAAGTTCACTATTCTCTGTGGTTGATAAAACCAAGTGGGAGTCTATGAGGGACGACAAGATTTGGAATTTGCCACAAAAAGAAAGAGACATTTTGCCTGCTCTTGAAATAAGTTACAATCAACTTCCTTCACATTTGAAACCTTGTTTTGTTTGCTTCTCCCTTTTTTCTGAGGGTTCTGAATTCTTTAGTTTTTATGTTACTAAGTTGTGGGAGGCACTTGGTTTTCTTCCACCACCAAATGAAAATGAGACAATGGATGATGTTGCCATTCAATTTTTGCATGAGCTGTGGTCAAGATCTTTTCTCACAGATTTCACTGAATTGAGCCATGGTTACAGTTTTAAATTACATGATCTAGTTCATGATCTTGCTATGTATGCTGCCAAAGGTGAGTTTCAAACAATATACCCTCGCAGTTCAATAATATCTCCCAATGCTCGACATTTGGCATTCAGTGAGAATAACTTGCTAGACCAAGCTGTCATTCCCACAGGTCTGAGAACTATAATTTTTCCTGATGAAGCTTCCAATGAAGTTTTCATGAATACATTGGTGTCAAGGTGCAAATACTTGAGATTTTTGGAATTAAGTAACTCTAAATTAGAGAGTTTACCTCCCTCCCTTGGAAAGTTGAAACATTTAAGATATCTCTGTCTCTTTGGGAATAAAAAGCTCAAGGGACTCCCTTCCTCAGTATGCAACCTGCAAAATTTGGAAACTTTGAACCTTAATGGATGCACAGAGCTACAAGAATTGCCCAAAGGAATGAGAAAACTTATCAGCCTACGTCGCCTACACATAACCACAAAGCAACTTCATTTTCCGGACAAAGAAATAGCAAATTTGACTTCTTTAGAGACTTTGACATTCAATTCTTGTGATAATTTGGAGTCACTGTTTGAAGGGATACAACTTTCTACTCTTAAAAATTTGTCTTTGCATCACTGCGGGAATCTAAAGTCTTTGTCCTTTCATGTCATAACAAATTTGGAGAATTTGGTTATCGAGAGTTGTTGTGAGTTGGAATTGTCAATGGACTTTGGCAACCAAATCCCTGATTTAAGGTTAAAGTCTCTTGGTCTTAAAAGTTTGCAACAGTTGGTCAGTTTGCCTCAATGGTTGCAAGGATCTGTGAACACACTACATTCCTTGGTGATTGCTGACTGCAACAATCTTAAGGAGCTTCCTGAATGGCTGTCATCTATGATTTGTCTCAAACTGCTTGTAATTGAGTACTGTCCATACCTGCAGTCACTCCCTGATAACCTCACAAATCTTGAAAATCTAGTGATTAACAACTGTCCTGAATTATGCAGAAGATACCAGCCGGGGGTTGGACAGGATTGCCACAAAATATCTCACATCAAACAAGTTTTTGTTGGTGAATTGGAAGAGTGA 2532 0.4024 MAESLIFSFAESLIGKIASRAVEEASLAVGVHSELQQMKATMALIRGVLLDAQQKNPLSSALTEWLRQVKHVFSDAEDIVDDFQCEALRKHVVNTYGSCSRKVRRFFSTSSPLVYRLRMAHRIQDINTMLAKLGDQRSMFGLQIIDQDTHVVHVRETTHSYVNPSNVTGREHDKNEIVKLLVQDGHHQSLSVIPIVGMGGLGKTTLAKLVFNDTNIDACFPLKMWVCVSNDFELRNVLIKILSSAINPTRENFNNFETEQLQNRLRNTIQGQKFLLVLDDVWNEDGARWDELKEIIDVGVEGCKILVTTRSHLTATMMCTKSSNSYLLERLSEEDSFSLFVKTAFKEGKEKSFPQLLEIGKEIVNKCGGIPLAVKTLASSLFSVVDKTKWESMRDDKIWNLPQKERDILPALEISYNQLPSHLKPCFVCFSLFSEGSEFFSFYVTKLWEALGFLPPPNENETMDDVAIQFLHELWSRSFLTDFTELSHGYSFKLHDLVHDLAMYAAKGEFQTIYPRSSIISPNARHLAFSENNLLDQAVIPTGLRTIIFPDEASNEVFMNTLVSRCKYLRFLELSNSKLESLPPSLGKLKHLRYLCLFGNKKLKGLPSSVCNLQNLETLNLNGCTELQELPKGMRKLISLRRLHITTKQLHFPDKEIANLTSLETLTFNSCDNLESLFEGIQLSTLKNLSLHHCGNLKSLSFHVITNLENLVIESCCELELSMDFGNQIPDLRLKSLGLKSLQQLVSLPQWLQGSVNTLHSLVIADCNNLKELPEWLSSMICLKLLVIEYCPYLQSLPDNLTNLENLVINNCPELCRRYQPGVGQDCHKISHIKQVFVGELEE* 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2624 843 Pfam NB-ARC domain 171 395 IPR002182 GO:0043531
Pvu7g2624 843 PANTHER OS08G0543100 PROTEIN 27 816 - -
Pvu7g2624 843 SUPERFAMILY L domain-like 485 819 - -
Pvu7g2624 843 PANTHER DISEASE RESISTANCE PROTEIN RP 27 816 IPR044974 GO:0006952
Pvu7g2624 843 Gene3D - 330 420 IPR042197 -
Pvu7g2624 843 Gene3D - 10 124 - -
Pvu7g2624 843 CDD RX-CC_like 8 133 IPR038005 -
Pvu7g2624 843 Gene3D Ribonuclease Inhibitor 682 822 IPR032675 -
Pvu7g2624 843 Gene3D Ribonuclease Inhibitor 512 681 IPR032675 -
Pvu7g2624 843 Gene3D - 149 323 IPR027417 -
Pvu7g2624 843 PRINTS Disease resistance protein signature 192 207 - -
Pvu7g2624 843 PRINTS Disease resistance protein signature 268 282 - -
Pvu7g2624 843 PRINTS Disease resistance protein signature 367 381 - -
Pvu7g2624 843 PRINTS Disease resistance protein signature 611 627 - -
Pvu7g2624 843 Pfam Rx N-terminal domain 11 98 IPR041118 -
Pvu7g2624 843 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 429 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2624 Pvu-Chr7 49307925 49311417 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2624 190 804 WRKY Transcription Factor Family AT5G45050 23.134 5.65e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2624 - - gmx:100780033 1135.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2624 7 49307925 49311417 Pvu7g2624 7 49307925 49311417 ECH