Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2620 ATGGCGGAATCACTTCTTTTCAGCTTTGCAGAATCACTCATAGGGAAGGTCACTTCTCGTGCCGTCAAAGAAGCTTCTTTGGCGCTTGGTGTGCATAGTGAGCTACAACAGATGAAAACAACTATGACACTCATCAGAGGTGTGCTCTTAGATGCTCAGCAAAAGAATCCGCTGAGCAGTGCACTGAGCGAATGGCTGAGACAAGTCAAGCGCGTCTTTTCTGATGCTGAAGACATAGTTGATGACTTTGAGTGCGAAGCCTTGCGAAAGCACGTTGTCAAAACCTATGGCGACTGCTCAAGGAAGGTACGCCATTTCTTCTCAACAAGTAATCCTCTTGTTTATCGTCTTAGAATGGCGCATCGCATTCAAGATATCAACACCAGGTTGGCCAAACTTGCAGCCCAACGAAGCATGTTTGGCCTCCAAATCATTGACCAAGATACACGTGTGGTGCATGTGAGGGAAATGACTCATTCTCATGTAAACCCTTCCAATGTTACAGGAAGGGAACATGACAAAAATCAAATAGTCAAACTTTTGGTGCAAGATGTTCATCACCAAACTCTTTCTGTCATTCCCATTGTGGGAATGGGAGGCCTAGGAAAAACCACACTTGCAAAGTTGGTCTTCAATGACACTAACATTGATGCATGTTTTCCCTTGAAGATGTGGATGTGGGTGTGCGTCTCTAATGATTTTGAACTTAGGAATGTCCTCATTAAAATTCTCAATTCTGCTCCAAACCCAACGAGGGAAAACTTCAATAACTCTGAGACTGAGCAACTTCAAAATCGTTTGAGAAATACACTTCAAGGTGAGAAGTTCTTGCTTGTGTTGGATGACGTGTGGAACGAGGATCGTGCAAGATGGGGTGAGTTGAAGGAAATAATAGATGTAGGTGTTGAAGGGAGTAAAATCCTACTGTCTACACGTAGCCATGAAATAGCTACCATGATGCACACTAAATCCTCAAATTCGTACCTTCTACAATGCCTCTCTAAAGAGGATTCTCGTTCTCTATTTATTGGGGAAGAAATTGTAAAAAAATGTGGAGGCTTACCATTAGCACTGAAAACAGTGGGGAGTTCACTATTCTCGAGGGTTGATAAAAAAGAGTGGGAGTCCATAAGAGATAATAAGATTTGGAATTTAAAACAAAATGAAAAAGGCATTTTACCTGCTCTGAAACTGAGTTACGATCAACTTCCTTCGTATTTAAAACCATGTTTTGCTTCTTTTTCCCTTTACAAAGAGGATACTGATATCTTTAGTTCTGAAGTTTCTGTGTTGTGGGAAGCACTTGGTTTTCTTCCCCCACCAAAGGAAGGTGAATCAACGATTGATGCTGCGAGACAATTTTTGCATGAACTATGGACAAGATCGTTTCTTTCAGATTATGAAGACTTAGGGAGTGAGTACTCTTTTAAGTTACATGATTTGGTGCATGATCTTGCAACTTATATCGCAAAAGGTGAGTTTGAAACAATAGATTTCCACAATCCAAAAATATCTGAGGGTACCCAACATTTGACATTTGGGGAAAATAATTTTTATGGTGAATCTCTTCTTCCCACAGGTCTCAGAACTATGATATTTCGTAAAGCAGGGAACAATAAAGATTTTTTGAATACATTGGTGTCAAGGTGCAAATACTTGAGGATTTTAAACTTGCAATATTCCGAATACGAGAGTCTGCCTCGTTGCATCGGAAAGTTGAAACATTTAAGATACCTCAGTCTTGCACAAAATAAAAAACTTAAGGAACTCCCTGATTCAATATGCAAATGCAAACTTCAAAATTTGCAAACTTTGATCCTTATAGGATGCATAAAGCTACAAACATTACCCAAAGGAATAAAAATTCTAGTTAGCCTTCGTCACTTGGCTATAACCACCACACTACCTTATTTTCCTAAAGAAGTGATTGCAAATTTGACTTCTCTAAGAACATTTGTTTTATTTATCTACTGTTGTGACAAGTTGGAATTGTCAATGGATATTGAAAGTCAAATCCCCAATTTAAGGTTAAAGTGTCTTGGTCTTAATCAATTGCCACAACTGGTCACTTTTCCTCAATGGTTACAAGGATCTGCGAACTCTTTAGAATCCCTAATAGTTGGCAATTGCATCAATCTTGAGGAGCTTCCCAACTGGCTACCATCTACAATTTGTCTCAAAATACTTAGCATTTGCAATTGTCCAAATATGTTGTCACTCCCTGATAACATGCATCACCTCACAAATCTTAAAGATTTAGAAATCATTGGTTGTCCTGAATTACGCAAAAGATTGAAGCCAGAAGTTGGACAGGATTGGCACAAGATATCACACATCAAACGAGTTTACATTGATGAATCAGAAAATGAAGAAGAATCCTCATAA 2385 0.3904 MAESLLFSFAESLIGKVTSRAVKEASLALGVHSELQQMKTTMTLIRGVLLDAQQKNPLSSALSEWLRQVKRVFSDAEDIVDDFECEALRKHVVKTYGDCSRKVRHFFSTSNPLVYRLRMAHRIQDINTRLAKLAAQRSMFGLQIIDQDTRVVHVREMTHSHVNPSNVTGREHDKNQIVKLLVQDVHHQTLSVIPIVGMGGLGKTTLAKLVFNDTNIDACFPLKMWMWVCVSNDFELRNVLIKILNSAPNPTRENFNNSETEQLQNRLRNTLQGEKFLLVLDDVWNEDRARWGELKEIIDVGVEGSKILLSTRSHEIATMMHTKSSNSYLLQCLSKEDSRSLFIGEEIVKKCGGLPLALKTVGSSLFSRVDKKEWESIRDNKIWNLKQNEKGILPALKLSYDQLPSYLKPCFASFSLYKEDTDIFSSEVSVLWEALGFLPPPKEGESTIDAARQFLHELWTRSFLSDYEDLGSEYSFKLHDLVHDLATYIAKGEFETIDFHNPKISEGTQHLTFGENNFYGESLLPTGLRTMIFRKAGNNKDFLNTLVSRCKYLRILNLQYSEYESLPRCIGKLKHLRYLSLAQNKKLKELPDSICKCKLQNLQTLILIGCIKLQTLPKGIKILVSLRHLAITTTLPYFPKEVIANLTSLRTFVLFIYCCDKLELSMDIESQIPNLRLKCLGLNQLPQLVTFPQWLQGSANSLESLIVGNCINLEELPNWLPSTICLKILSICNCPNMLSLPDNMHHLTNLKDLEIIGCPELRKRLKPEVGQDWHKISHIKRVYIDESENEEESS* 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2620 794 PANTHER DISEASE RESISTANCE PROTEIN RP 24 766 IPR044974 GO:0006952
Pvu7g2620 794 Pfam NB-ARC domain 171 401 IPR002182 GO:0043531
Pvu7g2620 794 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 412 IPR027417 -
Pvu7g2620 794 Gene3D - 324 404 IPR042197 -
Pvu7g2620 794 PANTHER OS08G0543100 PROTEIN 24 766 - -
Pvu7g2620 794 CDD RX-CC_like 8 134 IPR038005 -
Pvu7g2620 794 SUPERFAMILY L domain-like 477 758 - -
Pvu7g2620 794 Pfam Rx N-terminal domain 11 98 IPR041118 -
Pvu7g2620 794 Gene3D - 149 323 IPR027417 -
Pvu7g2620 794 Gene3D - 10 124 - -
Pvu7g2620 794 Gene3D - 406 487 IPR036388 -
Pvu7g2620 794 Gene3D Ribonuclease Inhibitor 526 775 IPR032675 -
Pvu7g2620 794 PRINTS Disease resistance protein signature 192 207 - -
Pvu7g2620 794 PRINTS Disease resistance protein signature 270 284 - -
Pvu7g2620 794 PRINTS Disease resistance protein signature 351 365 - -
Pvu7g2620 794 PRINTS Disease resistance protein signature 571 587 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2620 Pvu-Chr7 49281755 49289679 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2620 185 761 WRKY Transcription Factor Family AT5G45050 23.609 5.37e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2620 - - vra:106771654 1122.46