Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2617 ATGGCCGAATCACTTCTTTTCAGCTTAGCAGAATCGGTCATAGAAAAGCTCGCTTCTGGTGTCGTTCAAGAAGCTTCTTTGATCCTTGGTGTGCATAGCGAGTTACAAGAGATGAAAGCAACTATGGCACTCATCAGAGGTGTTCTCTTAGATGCTCAGCAAAAGAATTTCCTCAGCAGTGCACTGAGTGAATGGCTGAGACAGATCAAACGCGTCTTTTCTGATGCTGAAGATATAGTCGATGATTTTCAGTGTGAAGCCTTGCGGAAGCACGTTGTCAAAACCTATGGTGGCATCTCAAGGAAGGTAAGCCATTTCTTCTCAACAAGTAATCCTCTTGTTTATCGTCTTAGAATGGCGCATCGCATTCAAAATATCAACACCAGGTTGGCCAAACTTGCAGTCCAAAGAACCATGTTTGGCCTTCAAATCATTGACCAAGATACACGTGTGGTGCACGTGAGGGAAATGACTCATTCTCATGTAAACCCTTCCAATGTTACAGGAAGGGAACATGACAAAAATCAAATAGTCAAACTTTTGGTGCAAGATGTTCATCACCAAACTCTTTCTGTTATTCCCATTGTGGGAATGGGAGGCTTGGGAAAAACCACACTTGCTAAGTTGGTCTTCAATGACCCCATCATTGATGCATGTTTTCCACTAAAGATGTGGGTGTGTGTCTCTAATGATTTTGAACTTAGGAATGTGCTTATTAAAATTCTCAATTCTGTTCCAAACTCAACTAGGGAAAACTTCAATAACTTTGAGACAGAGCAATTTCAAAATCGTTTGAGAAATATAATTCAAGGTCAGAAGTTCTTTCTTGTGTTGGATGACGTGTGGAACGAGGATCGTGTAAGATGGGATGAGTTGAAGGAAATAATAGATGTAGGTGTTGAAGGGAGTAAAATCCTAGTGACTACTCGTAGCCATGAAATAGCTACCATGATGCGCACTAAATTCTCAAATTCGTACTTTCTACAATGTCTCTCAGAAGAGGATTCTCGTTCTCTATTTGTGAAGTCTGCTTTTGAAGATGGAGATGAGAAAAAACACCCACAACTATTGGAGATTGGAGAAGAAATTGTAAGAAAATGTGGAGGGTTACCATTGGCAGTGAAAACGGTGGGGAGTTCACTATTCTCGAGGGTTGATAAGAAAGAGTGGGAGTCCATAAGAGACAATGAGATTTGGAATTTAAAACAAAATGAAAAAGGAATTTTGCCAGCTCTCAAACTGAGTTATGATCAGCTGCCTTCATACTTAAAACCATGTTTTGCTTCTTTCTCCCTTTACCCACAGGACTTGAGTTTTACTTGTGCTCACATTTCTATCATATGGGGAGCACTTGGTTTTCTGCCACCGTCAAAGGAAAGTGAATCAGTGATTGATATTACATATCAACTTATGCATGAACTATGGTCAAGATCTTTTCTTTCAGATTATGATGACATGGGGAACGATTGCACATTTAAGTTACATGATTTGGTGCACGATCTTGCAACTTATATTGCAAAAGGTGAGTTTGAAAGAATAGATCTCCGCAATCCAAAAATATCTGAGAATGTCCAACATTTAGTCTTTATGGATAATAATTTGCTTGCTCAAGCTTTTCCTCTCACAGGTTTGAGAAGTCTGTGTTTTCCTATTGGAATGAACAATCAAGCTTTGTTGAATACATTCTTGTCAAGATGCAAATACTTGAGGATTTTAGAATTAAGTTCTTATGAATTCGAGAGTTTGCCTGACTGCATTGGAAAGTTGAAACATTTAAGATATCTTAATCTTCAAGTTAGTGAAAACCTAGAAGGACTCCCGAATTCGGTTTGCAAACTTCAAAATTTGCAAACTTTGGATCTTTGTGGATGTATAAAGCTACAAAAATTACCCAAAGGAATAAGAAATCTTATCAGCCTTCGAAACCTTATTATAACCACCAAACAACTTGATTTTCCAAAAGGAGAGATTGCAAGTTTGACTTCATTAGAAAATTTATATTTTTATCATTGTGATAATTTGGAGTCATTGTTCGAAGGAATACTACTACCCACTCTTAAAAAACTATCTTTACATGACTGTAAAAGTTTAAAGTTCGTGTCGTTTGACGCCATTACAAATCTAAAGGGTTTGAGTATCTCTCAATGCTACAAGTTGGAATTGTGGATGGGTGTTGGAAACCAAATCCCCGATTCAAGGTTAAAGTCTCTTACTCTTCAAGACTTACCACAACTGGTTACGCTGCCTCAGTGGTTTCAAGGATCTGCCAACTCTTTAGAAACATTAGTTATTGCAGATTGCATCAATTTTAAGGAGCTTCCGGATTGGCTACCAACTCTGATTTCTCTTAAAATACTTGTAATTATAAATTGTCCAAATTTGTTGTCACTCCCTGATAGCATGCATCACCTCACAAATCTTAAAGAGTTAAAAATCTTTGGTTGCCCTGAATTATGCAAAAGATTAAAGCATGAAGTTGGACAGGATTGGCACAAGATATCTCATATCCAAAAAGTTGACATTGATGAATCAGAAAATGAACAAGAGTTCTCAGAATAA 2559 0.3775 MAESLLFSLAESVIEKLASGVVQEASLILGVHSELQEMKATMALIRGVLLDAQQKNFLSSALSEWLRQIKRVFSDAEDIVDDFQCEALRKHVVKTYGGISRKVSHFFSTSNPLVYRLRMAHRIQNINTRLAKLAVQRTMFGLQIIDQDTRVVHVREMTHSHVNPSNVTGREHDKNQIVKLLVQDVHHQTLSVIPIVGMGGLGKTTLAKLVFNDPIIDACFPLKMWVCVSNDFELRNVLIKILNSVPNSTRENFNNFETEQFQNRLRNIIQGQKFFLVLDDVWNEDRVRWDELKEIIDVGVEGSKILVTTRSHEIATMMRTKFSNSYFLQCLSEEDSRSLFVKSAFEDGDEKKHPQLLEIGEEIVRKCGGLPLAVKTVGSSLFSRVDKKEWESIRDNEIWNLKQNEKGILPALKLSYDQLPSYLKPCFASFSLYPQDLSFTCAHISIIWGALGFLPPSKESESVIDITYQLMHELWSRSFLSDYDDMGNDCTFKLHDLVHDLATYIAKGEFERIDLRNPKISENVQHLVFMDNNLLAQAFPLTGLRSLCFPIGMNNQALLNTFLSRCKYLRILELSSYEFESLPDCIGKLKHLRYLNLQVSENLEGLPNSVCKLQNLQTLDLCGCIKLQKLPKGIRNLISLRNLIITTKQLDFPKGEIASLTSLENLYFYHCDNLESLFEGILLPTLKKLSLHDCKSLKFVSFDAITNLKGLSISQCYKLELWMGVGNQIPDSRLKSLTLQDLPQLVTLPQWFQGSANSLETLVIADCINFKELPDWLPTLISLKILVIINCPNLLSLPDSMHHLTNLKELKIFGCPELCKRLKHEVGQDWHKISHIQKVDIDESENEQEFSE* 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2617 852 Gene3D Ribonuclease Inhibitor 510 851 IPR032675 -
Pvu7g2617 852 PANTHER OS08G0543100 PROTEIN 27 822 - -
Pvu7g2617 852 Gene3D - 422 503 IPR036388 -
Pvu7g2617 852 SUPERFAMILY L domain-like 493 833 - -
Pvu7g2617 852 Gene3D - 10 124 - -
Pvu7g2617 852 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 428 IPR027417 -
Pvu7g2617 852 CDD RX-CC_like 12 134 IPR038005 -
Pvu7g2617 852 Gene3D - 330 420 IPR042197 -
Pvu7g2617 852 Pfam NB-ARC domain 171 417 IPR002182 GO:0043531
Pvu7g2617 852 Gene3D - 150 324 IPR027417 -
Pvu7g2617 852 PRINTS Disease resistance protein signature 192 207 - -
Pvu7g2617 852 PRINTS Disease resistance protein signature 268 282 - -
Pvu7g2617 852 PRINTS Disease resistance protein signature 367 381 - -
Pvu7g2617 852 PRINTS Disease resistance protein signature 611 627 - -
Pvu7g2617 852 Pfam Rx N-terminal domain 11 100 IPR041118 -
Pvu7g2617 852 PANTHER DISEASE RESISTANCE PROTEIN RP 27 822 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2617 Pvu-Chr7 49260558 49263116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2617 185 774 WRKY Transcription Factor Family AT5G45050 22.129 1.13e-08 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2617 - - vra:106771654 1184.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2617 7 49260558 49263116 Pvu7g2617 7 49260558 49263116 ECH