Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2593 ATGAACTGTGGAGTTCATCACCATCAACCTTCTTCAATCTCTTCTCTCACATCAGTCTCAGAAATGGAGGAAGAAAGTGAGACAGGGTTGTTGCAGTGTATGAGGAAATTGTCAACACCAGCGTTCTTGTTGAAGACATACATGTTGGTTGAGGATGCTTCCACCAATGATGTTGTGTCGTGGAATGATGATGGAACAACGTTTGTGGTGTTGCAACCTGCTGAGTTTGCTCGTGATCTTCTTCCAACTCTCTTCAACCATTGCAACTTCTCTAGCTTTCTTCGCCAGCTCAGTACTTATGGTTTTCGTAAAGTTGCCACAAGCAGATGGGAGTTTTGCAACGAGCGATTCAGAAAGGGTGAGAAAGAACTTCTATGCCAGATTAGACGTAAGAAATCACGCGTGAGGAAGAGACAACACACCAGTAATATTGATGAAGATGAAAGGTTCTTAGTATCAGCATTTTCTTCAGATTATGCAATTCTGATGGATGAAAACAAGCGACTGAAGAAGGAGAATGGGGTGTTGCACTCAGAGCTCACAAACATGAAGAGGAAGTGCAGGGACTTGCTGGATTTGGTGACCAAATATTCATGTGCAATGCAAGAAGGGGTGGATCAGAAGCCATTGTCGTTTCGGCTGAGATTGGAAGAAGTTCAAGGAGAAAGGTGA 672 0.4345 MNCGVHHHQPSSISSLTSVSEMEEESETGLLQCMRKLSTPAFLLKTYMLVEDASTNDVVSWNDDGTTFVVLQPAEFARDLLPTLFNHCNFSSFLRQLSTYGFRKVATSRWEFCNERFRKGEKELLCQIRRKKSRVRKRQHTSNIDEDERFLVSAFSSDYAILMDENKRLKKENGVLHSELTNMKRKCRDLLDLVTKYSCAMQEGVDQKPLSFRLRLEEVQGER* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2593 223 Pfam HSF-type DNA-binding 42 131 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pvu7g2593 223 Coils Coil 166 186 - -
Pvu7g2593 223 PRINTS Heat shock factor (HSF) domain signature 42 65 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pvu7g2593 223 PRINTS Heat shock factor (HSF) domain signature 80 92 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pvu7g2593 223 PRINTS Heat shock factor (HSF) domain signature 93 105 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pvu7g2593 223 PANTHER HEAT STRESS TRANSCRIPTION FACTOR B-3 26 222 - -
Pvu7g2593 223 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 26 222 IPR027725 -
Pvu7g2593 223 Gene3D - 34 133 IPR036388 -
Pvu7g2593 223 SMART hsfneu3 38 131 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pvu7g2593 223 SUPERFAMILY "Winged helix" DNA-binding domain 39 131 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2593 Pvu-Chr7 49052994 49056187 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2593 40 197 HSF AT2G41690 53.073 8.65e-58 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Pvu7g2593 HSF_DNA-bind 7.1e-29 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2593 K09419 - gmx:100802739 254.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2593 7 49052994 49056187 Pvu7g2593 7 49052994 49056187 ECH
Pvu1g1359 1 37103243 37105710 Pvu7g2593 7 49052994 49056187 PCT