Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2571 ATGGCTGCAAATGAAGATGCTGCGCAGGAATTTGAACCAAAGAAGAAGCCACCAACAGAGGATGAGAAGAGGAAGAAGAAAATTACGCCTGGGAGTTTGATGAAAGCTTTGATGAGGCCTGGTGGAGGTGATGCTGGACCTTCAGATGGTGATCAGATTATCTATCACTGCACCATTCGAACTTTGGATGGAGTACTTGTGGAATCTACCAGATCTGATTATGGAGGAAAAGGCACCCCAATAAGGCATGTTTTGGGCAAAAGCAAGATGTTATTGGGCTTACTAGAAGGAATTCCTACAATGTTGAAGGGTGAAGTGGCAATGTTCAAGATGAAGCATCAGTTGCATTATGGTGAAGATGATTGTCCTATTTCCGCCCCAGATGGTTTTCCTAAGGAGGACGAACTTCATTTCGAAATTGAGCTGATAGATTTTTTCAAAGCAAAGGTTGTTACTGATGATTTGGGAGTCGTAAAAAAGGTAGTGCAAGAAGGGCAGGGCTGGGAATCTCCAAGAGAACCTTATGAAGTAAAGGCTTGGATATCAGCAAAGACAGTTACTGGGAAATTGATCATGTCACATACAGAAGGAGAACCATACTTGTTTACATTTGGAAAATCAGAGCTACCTAAGGGCCTTGAAATGGCGATAGGAACAATGGTTCGGCAAGAGAAGGCTGTTATATATGTTACCACTCAGTATTTAACCGAGTCTCCTCTGATGCCTGTAATAGAAGATTATGATGAAGTCCATTTTGAAGTGGAGCTGGTTCACTTTATTCAGGTGAGGGACATGCTTGGAGATGGGTGCCTAATAAAACGCCGAATACATGATGGCAAAGGTGATTTTCCCATGGATTGTCCCCTTCATGACAGTCTACTTCGTGTTCATTACAAGGGTACTGTTCTCAATGAAGAAAAGAAGGTTTTTTATGATACAAGGGTAGACAATGATGGTCAACCATTAGAGTTCAGTTCTGGAGAAGGGCTTGTACCAGAGGGATTTGAAATGAGTGTTCGTCTGATGCTTCCTGGAGAGATAGCTCTCGTCACATGCCCTCCTGACTATGCCTATGATAAGTTTCCAAGGCCTTCAAATGTCCCTGAGGGTGCTCATATTCAATGGGAAATTGAGCTTCTAAGTTTTGAAACGCCAAAGGACTGGACAGGATTGGACTTTAAAACTATAATGAATGAAGCTGAAAGTATCAGAAACACGGGTAACAAGCTGTTCAAAGAAGGGAAATATGAACTTGCCAAGGCAAAGTATGAAAAGTTGCTTCGAGAATTTAATCATATCAATCCTCAAGATGATGAAGAAGGAAAGATTTTTGCAGACACAAGAAATTTGCTACATCTGAATGTTGCTGCATGCCATCTAAAACTGGGGGAATGCAAAAAGTCCATTGAGACTTGCAATAAGGTTTTGGATGCAAATCCTGCACATGTCAAGGGCCTTTATCGTCGTGGAATGGCCTACATGACTGCTGGAGATTTTGAAGAAGCAGGGGCTGATTTCAAAATGATGATGAAAGTTGACAAGTCAACTGAATCAGATGCAACTGCAGCTCTTCAAAAACTGAAGCAGAAGGAGCAGGAAGTCGAGAAGAAAGCTAGGAAACAGTTTAAAGGGCTATTTGACAAGAAGCCTGGAGAAATTGCGGAAGCTAAAGGTGATGCTGATGGAGATCAAATAACAAGCGAAAGCCTGAAGGATGAAGTACATGGGGACTCTGATGAAACAAGTTTTGAGGATTCACATGAACCACCACCTGAGGCACCTCGAAATAGTTGGTTCTCTCTCTTTTGGCCTTCTGGTAGAAGACTTTTTGAATCACTTGGGCTTAATAGATGTGCCATACTTTAA 1866 0.4196 MAANEDAAQEFEPKKKPPTEDEKRKKKITPGSLMKALMRPGGGDAGPSDGDQIIYHCTIRTLDGVLVESTRSDYGGKGTPIRHVLGKSKMLLGLLEGIPTMLKGEVAMFKMKHQLHYGEDDCPISAPDGFPKEDELHFEIELIDFFKAKVVTDDLGVVKKVVQEGQGWESPREPYEVKAWISAKTVTGKLIMSHTEGEPYLFTFGKSELPKGLEMAIGTMVRQEKAVIYVTTQYLTESPLMPVIEDYDEVHFEVELVHFIQVRDMLGDGCLIKRRIHDGKGDFPMDCPLHDSLLRVHYKGTVLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMSVRLMLPGEIALVTCPPDYAYDKFPRPSNVPEGAHIQWEIELLSFETPKDWTGLDFKTIMNEAESIRNTGNKLFKEGKYELAKAKYEKLLREFNHINPQDDEEGKIFADTRNLLHLNVAACHLKLGECKKSIETCNKVLDANPAHVKGLYRRGMAYMTAGDFEEAGADFKMMMKVDKSTESDATAALQKLKQKEQEVEKKARKQFKGLFDKKPGEIAEAKGDADGDQITSESLKDEVHGDSDETSFEDSHEPPPEAPRNSWFSLFWPSGRRLFESLGLNRCAIL* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2571 621 ProSiteProfiles TPR repeat profile. 483 516 IPR019734 GO:0005515
Pvu7g2571 621 SUPERFAMILY FKBP-like 266 389 - -
Pvu7g2571 621 MobiDBLite consensus disorder prediction 8 29 - -
Pvu7g2571 621 Gene3D - 149 261 IPR046357 GO:0003755
Pvu7g2571 621 Coils Coil 517 540 - -
Pvu7g2571 621 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 292 380 IPR001179 GO:0003755
Pvu7g2571 621 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 47 143 IPR001179 GO:0003755
Pvu7g2571 621 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 173 257 IPR001179 GO:0003755
Pvu7g2571 621 Gene3D - 262 387 IPR046357 GO:0003755
Pvu7g2571 621 Gene3D - 1 148 IPR046357 GO:0003755
Pvu7g2571 621 SUPERFAMILY FKBP-like 149 259 - -
Pvu7g2571 621 MobiDBLite consensus disorder prediction 554 591 - -
Pvu7g2571 621 MobiDBLite consensus disorder prediction 1 45 - -
Pvu7g2571 621 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 50 146 IPR001179 GO:0003755
Pvu7g2571 621 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE PASTICCINO1 67 559 IPR031135 GO:0030154|GO:0042761|GO:0099402
Pvu7g2571 621 SUPERFAMILY TPR-like 397 539 IPR011990 GO:0005515
Pvu7g2571 621 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 67 559 - -
Pvu7g2571 621 Gene3D Tetratricopeptide repeat domain 394 548 IPR011990 GO:0005515
Pvu7g2571 621 SUPERFAMILY FKBP-like 23 149 - -
Pvu7g2571 621 SMART tpr_5 449 482 IPR019734 GO:0005515
Pvu7g2571 621 SMART tpr_5 483 516 IPR019734 GO:0005515
Pvu7g2571 621 SMART tpr_5 400 433 IPR019734 GO:0005515
Pvu7g2571 621 MobiDBLite consensus disorder prediction 554 597 - -
Pvu7g2571 621 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 291 383 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2571 Pvu-Chr7 48878490 48889334 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2571 28 548 Calmodulin-binding Proteins AT5G48570 30.320 9.79e-62 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2571 - - gmx:100527937 1134.01