Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2545 ATGGCAACAGAAGAAGAGGGTGGTGCTGGGGAAGATGTAGTGAGGTCAAGGAGTGAAGGAAGGAGGAGTTGTTCATCAGCAGCAAGCAGAGATTTGGCCTCAGCAAGGTTTGATGATGCAGTGAGTGGAGAGAGTGATGTGTTCCATAGAGGTGGAAGGGAAATAGAGGAAGAGGAGGAGCTGAAGTGGGAGGCTTTGAGGAGGCTTCCAACATATGATAGGATGAGGAGAGGCATTTTGAAGCAAGTTTTGGAGAATGGAGGAGTGAAGTATGAAGAGGTTGAGATCACCAAGCTTGGAGTGCAGGAAAAGAAGCATCTCCTTCAAAACATACTTGGGACTGCTGAAGAGAACAATGAGAGTTTCCTCCATATCATGAGGGAGAGAATTGATAGGGTAGGCATTGAGATTCCCAAGATTGAAGTCAGGTATGAGCACTTATCAGTTGAAGGGGATGCATATGTTGGAACAAGGGCACTACCAACACTCTTCAATTTTACTCTCAATGCAATTGAGGTACTAGTGAATTATCTTTTAAACTTTGTGTTTGGAGTTCTGGGATTTCTTTCCCTTTTGCCTTTACATACAAAGGCTGTCAAGATTCTCCAAGAAAAAGTTGTGAAGATTCTCAAAGATATTAGTGGAATTGTGAAGCCATCAAGAATGACGCTGCTTCTGGGACCTCCAGGATCAGGAAAAACAACATTCCTGCAGGCACTTGCTGGAAAAATGGACAAGGATTTAAGGGCATCAGGAAGAGTGACTTACTGTGGTCATGAATTGTCAGAGTTTGTTCCTGAAAGAACATGTGCATATATTAGCCAGCATGATCTTCACTATGGAGAAATGACAGTGAGAGAGACACTGGACTTTTCTGGACGCTGCCTGGGAGTTGGAACAAGGTATGACATGCTGGAAGAGTTGTCCAGACGGGAAGTAGCAGCAGACATTAAACCAGATCCTGAGATAGACGCTTTCATGAAAGCCACAGCAATGGAAGGTCAAGAAACAAGTCTTGTTACTGATTACATTCTAAAGATTCTTGGGTTGGAACTATGTGCTGATATTTTGGTGGGAGATGAGATGCAAAGGGGCATATCTGGTGGACAAAAGAAGCGTTTAACTACTGGTGAGATGTTGGTAGGCCCTGCAAAAGCATTCTTCATGGATGAAATTTCAACTGGTTTGGATAGTTCCACAACCTTCCAAATTGTCAGGTTTATGAGGCAGATGGTCCATATCATGGATGTTACTATGATTATCGCTCTTCTGCAACCTGCACCAGAAACATATGAACTTTTTGATGACATAATATTGCTTTCAGAGGGTGAGATTGTCTATCAAGGTCCCCGTGAGAGTGTTGAGCATTTTTTTGAAACTGTGGGCTTCAAATGCCCACAAAGGAAAGGAGTTGCAGACTTCTTACAAGAGGTAACTTCCAAGAAGGACCAAGAACAGTATTGGTTCAGAAGGGACATACCTTACAAACATGTCACAGTGTCTGAGTTTGTAGCCCATTTCAAGAACTACAGCATCGGTCAGCAACTGCATGAAAAGATTAAAGTTCCATTTGATCCTAATGAAAGCCATCGTGCTGCATTGGTGAAGGAAAAGTATGGCATCTCCAAATGGGAAATCTTCAAGGCATGCTTTTCAAGAGAGTGGCTTTTGATGAAGCGCAACTATTTTATATACATATTCAAGACTTTTCAGATTACTATTTTAGCTTTGATTACCATGTCAGTGTTTTTCAGAACAGAAATGAAGCCTGGTGAACTTGAGGGTGCAGGAAAATATTATGGTGCATTATTTTTCAGCCTCCTTAATGTAATGTTCAATGGAGTGGCTGAGCTTGCAATGACAATCAATAGACTTCCCGTTTTCTACAAGCAGAGAGACTTCCTCTTCTTTCCAGCATGGGCTTTTGCATTGCCCATCTGGGTCCTCAGAGTTCCTCTTTCCCTATTGGAATCAGGATTATGGATCATCATCACTTATTATACTATTGGCTTTGCTCCTGCAGCTAGCAGGTTTTTTCGTCAGTTATTGGCCTTTTTCTGTGTGAATCAAATGGCTCTATCCCTATTCCGCTTTATTGCTGCAGTTGGAAGGACAAAAGTTGTGGCAAACACACTTGGTTCCTTCACAATTTTAGTTGTTTTTGTCCTAAGTGGATTTACTGTTTCAAGAGATGATATTGGACCATGGATGATATGGTGCTACTATGTTTCACCTATGATGTATGGCCAGAATGCAATAGCCATCAACGAGTTCCTAGACAAAAGATGGAGTGGTACAAATACTGACCCAAGAATTCCTGAGCCCACAGTTGGGAAGGCTTTTCTTAAAGCTAGAGGCATTTTTACAGAAGACTATTGGTACTGGAAATCTGTTGGTGCACTCATAGGATTTTCTTTGCTTTTCAACATTTGTTTCATTCTGGCTCTAACCTATTTGAATCCATTTGGAAACTCAAAATCTGTTATATTGGAAGATGAAGACCAAAAGAAAAGCACATTTGCTTCATCCTTTGTAGAAAAAATGGCAACAGGAACTACAGAGCAGAGTTCAGCTTCAGTTGCTAATTCATTTGAAGGTATTGATATGGAAGTTAGAAAAACGGATCATAGCTCAATTCCTAAAGCTCCAGAGAGTACAAAGTCCAAGAAGGGAATGGTGCTGCCCTTTAGGCCTCTGTCACTTGCATTTCAAGATGTCAATTATTACATCGATATGCCACTTGAAATGAAGAAACAAGGAATTGAAGAGAACAGACTCCAACTACTAAGAGACATATGTGGTGCTTTCAGGCCTGGGATTTTAACAGCATTGGTTGGTGTAAGTGGTGCTGGGAAAACCACCTTGATGGATGTTCTTGCAGGAAGGAAAACAGGTGGTTATATTGAGGGAAGCATCAGCATATCTGGTTATCCCAAAAACCAGGCAACTTTTGCTCGGATAAGTGGTTATTGTGAACAAAATGATATACATTCCCCAAATGTTACAGTCTACGAATCTCTTGTGTTTTCTGCTTGGCTGCGTCTAAGTAACGAGGTTAATGAGGAAACACGAAAGATGTTCATTGAAGAAATTTTGGAGCTGGTTGAGCTCCACTCAGTGAGACATTTTATAGTTGGCCTTCCTGGAATAAATGGCTTATCAACAGAGCAGAGAAAGAGGCTCACCATTGCTGTAGAATTGGTTGCAAACCCTTCCATTATTTTTATGGATGAACCAACAACTGGTCTAGATGCTAGAGCTGCAGCAGTTGTTATGCGTACTGTCAGAAATACAGTGGATACAGGTCGAACTGTTGTCTGCACAATTCATCAACCAAGCATTGATATATTTGAAAATTTTGACGAGCTGCTTTTGATGAAGAGAGGTGGACAAGTGATTTATGGTGGTCCTCTTGGTCGGAATTCTCAGAATCTTATTGAGTACTTTGAGGGTATCACAGGAGTTCCTGAGATTAAAGATGGATATAATCCAGCCACATGGATGCTGGAGATCACTTCTCCTATTGTTGAGTCTCAGCTTGGTGTGGACTTTGGAGAATTATATACTAAGTCGGACCTTTATCAAAAGAACCAGGAACTTATTAAGGAAATATGCACACCAGTACCTGGAACAAAGGACCTTTACTTTCCGACTAAATACTCTCAATCATTTGTTACTCAATGCAAGGCTTGCTTCTGGAAGCAGAATTGCTCCTATTGGAGGAATCCACAGTATAATGCCGTCAGATTCTTCATCACAATAGTTATTGGTCTCATTTTTGGACTTATTTATTGGGACAAAGGAAAAAAGACGGAAAAGGAGCAGGACCTGTTGAATCTCCTTGGAGCTATGTATGCATCAGTATTTTTCCTTGGAGCCTCCAACACTAACAGTGTTCAACCAGTTGTTGCAATAGAAAGAACAGTTCTATACCGTGAAAGAGCTGCTGGAATGTACTCAGAATTGCCGTATGCAATTGGTCAGGTAGCAATTGAAGTCATTTATGTTGCAACTCAAAGTCTAGCCTATTCCATTATTCTCTACTGGATGATTGGTTTTGAACCACGTTTTGAAAACTTTTTGTGGTTCTACTACTTCATATTCATGAGCTTTATGTACTTCACACTGTATGGAATGATGACTGTAGCTCTCACACCAAACTATCAAATTGCTGCAATTGTTATGTCCTTCTTCATCAATTTCTGGAACCTGTTCTCTGGTTTTCTTATCCCAAGAACGCAAATTCCAATATGGTGGAGGTGGTATTATTGGGGGTCTCCTGTGGCTTGGACTATATATGGACTGGTGACATCCCAAGTTGGTGACAAAAATAGTCCAATAGAGGTTCCTGGCTTTGGACTCATGACAGTAAAACAGTACCTTGACAGGCAATTCGGCTTTCAGCATGATTTCCTTGGAGTTGTTGCACTAACTCATGTTGCTTTTTGCCTTCTCTTCCTTTTAGTATTTGCATATGGCATCAAGTTCCTAAATTTCCAGAAAAGATAA 4509 0.4096 MATEEEGGAGEDVVRSRSEGRRSCSSAASRDLASARFDDAVSGESDVFHRGGREIEEEEELKWEALRRLPTYDRMRRGILKQVLENGGVKYEEVEITKLGVQEKKHLLQNILGTAEENNESFLHIMRERIDRVGIEIPKIEVRYEHLSVEGDAYVGTRALPTLFNFTLNAIEVLVNYLLNFVFGVLGFLSLLPLHTKAVKILQEKVVKILKDISGIVKPSRMTLLLGPPGSGKTTFLQALAGKMDKDLRASGRVTYCGHELSEFVPERTCAYISQHDLHYGEMTVRETLDFSGRCLGVGTRYDMLEELSRREVAADIKPDPEIDAFMKATAMEGQETSLVTDYILKILGLELCADILVGDEMQRGISGGQKKRLTTGEMLVGPAKAFFMDEISTGLDSSTTFQIVRFMRQMVHIMDVTMIIALLQPAPETYELFDDIILLSEGEIVYQGPRESVEHFFETVGFKCPQRKGVADFLQEVTSKKDQEQYWFRRDIPYKHVTVSEFVAHFKNYSIGQQLHEKIKVPFDPNESHRAALVKEKYGISKWEIFKACFSREWLLMKRNYFIYIFKTFQITILALITMSVFFRTEMKPGELEGAGKYYGALFFSLLNVMFNGVAELAMTINRLPVFYKQRDFLFFPAWAFALPIWVLRVPLSLLESGLWIIITYYTIGFAPAASRFFRQLLAFFCVNQMALSLFRFIAAVGRTKVVANTLGSFTILVVFVLSGFTVSRDDIGPWMIWCYYVSPMMYGQNAIAINEFLDKRWSGTNTDPRIPEPTVGKAFLKARGIFTEDYWYWKSVGALIGFSLLFNICFILALTYLNPFGNSKSVILEDEDQKKSTFASSFVEKMATGTTEQSSASVANSFEGIDMEVRKTDHSSIPKAPESTKSKKGMVLPFRPLSLAFQDVNYYIDMPLEMKKQGIEENRLQLLRDICGAFRPGILTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKNQATFARISGYCEQNDIHSPNVTVYESLVFSAWLRLSNEVNEETRKMFIEEILELVELHSVRHFIVGLPGINGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFENFDELLLMKRGGQVIYGGPLGRNSQNLIEYFEGITGVPEIKDGYNPATWMLEITSPIVESQLGVDFGELYTKSDLYQKNQELIKEICTPVPGTKDLYFPTKYSQSFVTQCKACFWKQNCSYWRNPQYNAVRFFITIVIGLIFGLIYWDKGKKTEKEQDLLNLLGAMYASVFFLGASNTNSVQPVVAIERTVLYRERAAGMYSELPYAIGQVAIEVIYVATQSLAYSIILYWMIGFEPRFENFLWFYYFIFMSFMYFTLYGMMTVALTPNYQIAAIVMSFFINFWNLFSGFLIPRTQIPIWWRWYYWGSPVAWTIYGLVTSQVGDKNSPIEVPGFGLMTVKQYLDRQFGFQHDFLGVVALTHVAFCLLFLLVFAYGIKFLNFQKR* 1503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2545 1502 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 207 466 IPR027417 -
Pvu7g2545 1502 MobiDBLite consensus disorder prediction 1 30 - -
Pvu7g2545 1502 PANTHER ATP-BINDING CASSETTE TRANSPORTER 20 1502 - -
Pvu7g2545 1502 Gene3D - 196 500 IPR027417 -
Pvu7g2545 1502 Pfam ABC-transporter N-terminal 115 166 IPR029481 -
Pvu7g2545 1502 Gene3D - 914 1147 IPR027417 -
Pvu7g2545 1502 Pfam ABC-2 type transporter 547 758 IPR013525 GO:0016020|GO:0140359
Pvu7g2545 1502 Pfam ABC-2 type transporter 1226 1438 IPR013525 GO:0016020|GO:0140359
Pvu7g2545 1502 CDD ABCG_PDR_domain2 898 1136 IPR034003 -
Pvu7g2545 1502 Pfam ABC transporter 210 392 IPR003439 GO:0005524
Pvu7g2545 1502 Pfam ABC transporter 931 1080 IPR003439 GO:0005524
Pvu7g2545 1502 SMART AAA_5 219 444 IPR003593 -
Pvu7g2545 1502 SMART AAA_5 938 1130 IPR003593 -
Pvu7g2545 1502 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 20 1502 - -
Pvu7g2545 1502 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 194 467 IPR003439 GO:0005524
Pvu7g2545 1502 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 916 1137 IPR027417 -
Pvu7g2545 1502 Pfam Plant PDR ABC transporter associated 771 829 IPR013581 -
Pvu7g2545 1502 Pfam ABC-2 type transporter 425 479 IPR043926 GO:0140359
Pvu7g2545 1502 Pfam ABC-2 type transporter 1110 1179 IPR043926 GO:0140359
Pvu7g2545 1502 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 901 1153 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2545 Pvu-Chr7 48659882 48672564 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2545 926 1113 Calmodulin-binding Proteins AT2G36910 27.586 2.11e-07 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2545 K08711 - gmx:100788067 2588.91