Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2540 ATGGCCAACAAATTACGTAATTCCCTCCCCAAAACATCCACATTTCTCCTCCTCCTTCTACCCTTCCTTTTCTTCTCCCATGTTTTCGCAGACACCTCTCCAACCACTTCTGTCTCTCCCAAAACCATATGCAAATCCACCCCAGACCCATCTTATTGCACTTCCCTGCTTCCTCCCCAAAACGGCAACGTTTACCACTATGGCCGCTTCTCGGTGAAAGAGTCTCTTTCACAGGCAACCAAGTTCTTGAACTTGGTTAACAGATACCTCCAACGCCGCTCCACTCTTTCAACCTCCGCAATCCACGCGCTCCAAGACTGTCAAACCCTCGCCGAACTCAACGTTGACTTTCTCTCCAGTTCCTTCCAAACGGTGAAACGAACAACCAGGCTCCTTCCCACTTCGCAAGCTGACGACATCCAAACCCTTCTCAGCGCCATTCTAACTAACCAACAAACCTGCTTAGAAGGCCTCCAAGCCACCGCTTCCGCTTGGCGTGTCAACAACGGACTCTTCCTCCCGCTTTCCAACGATACCAAGCTCTACAGTGTCTCTCTTGCCCTCTTCACCAAGGGCTGGGTCCCCACCAACACTAACGTCACCGAGTTTCACCCACCCGCCAAACACCGCGCCTTTCGAAACGGGCGTTTACCGCTCAAGATGTCCAGCAGAACGCGTGCGATCTACGAGTCCGTGAGTCGGAGAAAGCTTCTTCAGGCGAACGTGGGTGATGAGGTGAAGGTGATGGACATTGTCACTGTTAGCAAAGATGGTAGCGGGAACTTCACCACCTTGAACGACGCCATTGCGGCGGCGCCCAACAAGTCTTCCTCTACATCAGGGTACTTCCTCATCTACGTAACTGCGGGTGTTTACGAGGAAAATGTGTCCATTGATAAGAAAAAAAAGTACTTGATGATGATTGGAGATGGCATCAACAAGACAATTATTACAGGGAACCGCAGTGTTGTTGATGGCTGGACAACCTTCAAGTCGGCAACTTTTGCGGTGGTTGGAGAAGGATTTGTGGGTGTTAACATGACGATCCGTAACACTGCTGGAGCAGAGAAGCACCAAGCCGTAGCACTTCGTAACGGGGCAGATTTATCGACGTTTTACAGTTGCAGTATGGAGGGGTACCAAGACACGCTCTATGTGCACTCCCTGCGACAACTCTACAGGGAATGCGACATCTACGGCACCGTGGATTTCATATTCGGAAATGCGGCGACAGTGTTGCAAAACTGTAACATGTATCCTCGTCTTCCAATGAATGGTCAATTCAACGCCATAACCGCACAAGGCAGAACCGACCCCAACCAAAACACTGGAATTTCTATCCACAATTGTACGATTAGAGCAGCCGATGATTTGGCTGCGAACATGAACGCGGCTGAAACTTATCTGGGAAGGCCTTGGAAAAATTACTCAAGGACGGTTTACATGCAGAGTTTTATGGACAGTGTGATCCATGCAGCAGGGTGGCGAGCATGGGACGGTGATTTCGCTTTGACCACTTTGTATTATGCAGAGTTTAACAACACTGGACCTGGATCTACCACTGCCAACAGAGTCACCTGGCCTGGTTACCATGTCATTAACGCCACCGATGCTGCTAATTTTACCGTCTCTAACTTCTTGATCGGAGATAACTGGCTCCCCCAGACCGCAGTGCCTTACGCAAGTAACTTCGTATAG 1698 0.4994 MANKLRNSLPKTSTFLLLLLPFLFFSHVFADTSPTTSVSPKTICKSTPDPSYCTSLLPPQNGNVYHYGRFSVKESLSQATKFLNLVNRYLQRRSTLSTSAIHALQDCQTLAELNVDFLSSSFQTVKRTTRLLPTSQADDIQTLLSAILTNQQTCLEGLQATASAWRVNNGLFLPLSNDTKLYSVSLALFTKGWVPTNTNVTEFHPPAKHRAFRNGRLPLKMSSRTRAIYESVSRRKLLQANVGDEVKVMDIVTVSKDGSGNFTTLNDAIAAAPNKSSSTSGYFLIYVTAGVYEENVSIDKKKKYLMMIGDGINKTIITGNRSVVDGWTTFKSATFAVVGEGFVGVNMTIRNTAGAEKHQAVALRNGADLSTFYSCSMEGYQDTLYVHSLRQLYRECDIYGTVDFIFGNAATVLQNCNMYPRLPMNGQFNAITAQGRTDPNQNTGISIHNCTIRAADDLAANMNAAETYLGRPWKNYSRTVYMQSFMDSVIHAAGWRAWDGDFALTTLYYAEFNNTGPGSTTANRVTWPGYHVINATDAANFTVSNFLIGDNWLPQTAVPYASNFV* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2540 565 Gene3D - 246 564 IPR012334 -
Pvu7g2540 565 PANTHER PECTINESTERASE 33 563 - -
Pvu7g2540 565 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 7-RELATED 33 563 - -
Pvu7g2540 565 TIGRFAM PME_inhib: pectinesterase inhibitor domain 16 163 IPR006501 GO:0004857
Pvu7g2540 565 ProSitePatterns Pectinesterase signature 2. 398 407 IPR033131 -
Pvu7g2540 565 Gene3D Invertase/pectin methylesterase inhibitor family protein 39 191 IPR035513 -
Pvu7g2540 565 Pfam Pectinesterase 252 550 IPR000070 GO:0030599|GO:0042545
Pvu7g2540 565 Pfam Plant invertase/pectin methylesterase inhibitor 41 188 IPR006501 GO:0004857
Pvu7g2540 565 CDD PMEI-like_3 42 193 - -
Pvu7g2540 565 SUPERFAMILY Pectin lyase-like 251 561 IPR011050 -
Pvu7g2540 565 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 41 191 IPR035513 -
Pvu7g2540 565 SMART PMEI_2 35 188 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2540 Pvu-Chr7 48628860 48631054 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2540 16 565 Carbohydrate Esterase AT4G02330 62.787 0.0 725
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2540 K01051 - gmx:100790729 964.911