Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2527 GATGTTGCTGTCAAGATTCTTAAAGTGCAAGGTTTTGATCCTGGGCGATTTGAAGAATTTCTAAAGGAGGTCTCACTCATGAAGCGCCTTCGGCATCCAAATATTGTACTCTTGATGGGTGCAGTTATTCAACCCCCAAAGTTATCAATAGTAACCGAGTATTTATCTAGAGGCAGTTTGTATGAACTTCTGCACATGCCCAATGTTGGATCATCACTTAGTGAGAGGCGTCGCTTGAGTATGGCTTATGATGTGGCAAGCGGAATGAATTATCTTCATCAAATGAGACCTCCCATTGTTCACAGAGATTTGAAGTCTCCAAATCTTTTGGTTGATGATTCATACACTGTTAAGGTATGTGACTTTGGTCTTTCACGCACAAAGGCAAACACATTTCTTTCGTCTAAAACCGCAGCCGGGACTCCTGAATGGATGGCACCCGAAGTCATCAGAGGTGAACTGTCAAACGAAAAATGTGATGTATTCAGCTTTGGTGTAATTTTGTGGGAACTAGTGACCCTGCAACAACCATGGAGACATTTAAATCCTTCACAGGTTGTTGCGGCTGTTGGTTTTATGGACAAAAGGCTAGATATTCCAAGGCATGTGAATCCTGAAGTGGCTGCCTTGATTGAGCTCTCTTGGGCCACGGAACCCTGGAGACGGCCTTCTTTCTCCTATATTATGAAATGTTTACAGCAAATAATTGCTGATGCTAGAGGGTGA 726 0.4298 DVAVKILKVQGFDPGRFEEFLKEVSLMKRLRHPNIVLLMGAVIQPPKLSIVTEYLSRGSLYELLHMPNVGSSLSERRRLSMAYDVASGMNYLHQMRPPIVHRDLKSPNLLVDDSYTVKVCDFGLSRTKANTFLSSKTAAGTPEWMAPEVIRGELSNEKCDVFSFGVILWELVTLQQPWRHLNPSQVVAAVGFMDKRLDIPRHVNPEVAALIELSWATEPWRRPSFSYIMKCLQQIIADARG* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2527 241 PIRSF ILK 1 240 - -
Pvu7g2527 241 Pfam Protein tyrosine and serine/threonine kinase 1 232 IPR001245 GO:0004672|GO:0006468
Pvu7g2527 241 ProSitePatterns Serine/Threonine protein kinases active-site signature. 99 111 IPR008271 GO:0004672|GO:0006468
Pvu7g2527 241 Gene3D Transferase(Phosphotransferase) domain 1 57 240 - -
Pvu7g2527 241 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 1 239 - -
Pvu7g2527 241 ProSiteProfiles Protein kinase domain profile. 1 236 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g2527 241 SMART serkin_6 2 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g2527 241 PRINTS Tyrosine kinase catalytic domain signature 52 65 IPR001245 GO:0004672|GO:0006468
Pvu7g2527 241 PRINTS Tyrosine kinase catalytic domain signature 93 111 IPR001245 GO:0004672|GO:0006468
Pvu7g2527 241 PRINTS Tyrosine kinase catalytic domain signature 140 150 IPR001245 GO:0004672|GO:0006468
Pvu7g2527 241 PRINTS Tyrosine kinase catalytic domain signature 159 181 IPR001245 GO:0004672|GO:0006468
Pvu7g2527 241 PRINTS Tyrosine kinase catalytic domain signature 203 225 IPR001245 GO:0004672|GO:0006468
Pvu7g2527 241 CDD STKc_MAP3K-like 1 230 - -
Pvu7g2527 241 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 239 - -
Pvu7g2527 241 Gene3D Phosphorylase Kinase; domain 1 1 56 - -
Pvu7g2527 241 SUPERFAMILY Protein kinase-like (PK-like) 2 232 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2527 Pvu-Chr7 48499824 48506705 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2527 1 239 MAP Kinase Kinase Kinase AT5G03730 74.059 4.67e-121 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Pvu7g2527 PK_Tyr_Ser-Thr 8.1e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2527 K14510 - pvu:PHAVU_007G245400g 486.878