Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2513 ATGGAGTTACCTTCACCAGAGGAACTCATGCCTTTATCCCAAACCCTAATAACCCCTCATCTTGCCATAGCTTTTCACATAACAAACCCTTCACACAATCACCACCACCAACAATTTTATTCTTCGCAAGAACCACCGCAATTTCCACTTCAACCACCTTCCGCCGCCGAGGAGGAACCGGCGCGGACGCTCAAGCGGCCGCGGCTGGTGTGGACCCCGCAGCTGCACAAGCGCTTCGTGGATGCCGTGGCCCACTTGGGGATCAAGAACGCCGTTCCCAAGACCATAATGCAGCTCATGAGCGTCGACGGCTTGACCCGCGAAAACGTCGCCAGCCACCTCCAGAAATACCGCCTCTACTTGAAGCGCATGCAGGGCTTGGCCGGAGGCTCCGCCGCCGACTCCGCCACCGACCACCTCTTCGCCAGCTCGCCTGTGCCGCCGCACTTTCTGCAGGCCACTGCCCGTTCGACCTCCGAGCACTACCTGCCCTTTGTGCCGGCGTTGCAGCCGCACCGCCACCACCAGCAGATGGCGGTGGCCGCACATTTTGGTTCGCCGCGGAATGCGCAGTTTGAGCTACCCATTCTGTCGAGGATTGGCGCTTCGGTGCCGGGTTACGTGGAGGATGTGGAGTCAGGAAGGAGGAAGGTTCTTACTTTGTTTCCACCTGGAGATGATTGA 684 0.5892 MELPSPEELMPLSQTLITPHLAIAFHITNPSHNHHHQQFYSSQEPPQFPLQPPSAAEEEPARTLKRPRLVWTPQLHKRFVDAVAHLGIKNAVPKTIMQLMSVDGLTRENVASHLQKYRLYLKRMQGLAGGSAADSATDHLFASSPVPPHFLQATARSTSEHYLPFVPALQPHRHHQQMAVAAHFGSPRNAQFELPILSRIGASVPGYVEDVESGRRKVLTLFPPGDD* 228
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2513 227 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 2 227 IPR044841 GO:0003700|GO:0006355
Pvu7g2513 227 PANTHER HOMEODOMAIN-LIKE PROTEIN-RELATED 2 227 - -
Pvu7g2513 227 MobiDBLite consensus disorder prediction 33 63 - -
Pvu7g2513 227 Gene3D - 63 125 - -
Pvu7g2513 227 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 71 122 IPR017930 -
Pvu7g2513 227 SUPERFAMILY Homeodomain-like 63 123 IPR009057 -
Pvu7g2513 227 Pfam Myb-like DNA-binding domain 70 118 IPR001005 -
Pvu7g2513 227 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 67 119 IPR006447 GO:0003677
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pvu7g2513 Pvu-Chr7 48381502 48382571 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2513 10 227 G2-like Transcription Factor Family AT5G05090 52.439 2.25e-67 206
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pvu7g2513 Myb_DNA-binding 1.4e-08 CL0123
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2513 - - vra:106771029 370.163