Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2498 ATGGATATGTACATTCGTGTTAAACGTAGTAAGACAACCTACTTCATCCGGTGCAAGGCATCTGATAAAATTATTGACATAAAGCAGAAGTTGCAAGAACTTGTTGATCAGCCAACTAATAATCAACGGTTAATTCTTCCTGGTACAGGGGAAGTATTAGAAGACTCTAAGACTTTGGCAGATCAAAAGGTAGAAAATGATGCCGTTGTAGCTCTGACCTTGAGAAAAGATGATAATGAGTTTGAGGAGGTCGACATTGTTCGGCCTAACGATTTCTACCAAGCTCGGGATGCAGATGGTGCCAGTTGGTAA 312 0.4071 MDMYIRVKRSKTTYFIRCKASDKIIDIKQKLQELVDQPTNNQRLILPGTGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEVDIVRPNDFYQARDADGASW* 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2498 103 Pfam Ubiquitin family 5 76 IPR000626 GO:0005515
Pvu7g2498 103 SMART ubq_7 3 75 IPR000626 GO:0005515
Pvu7g2498 103 PANTHER OS03G0364000 PROTEIN 1 100 - -
Pvu7g2498 103 Gene3D - 1 92 - -
Pvu7g2498 103 ProSiteProfiles Ubiquitin domain profile. 1 79 IPR000626 GO:0005515
Pvu7g2498 103 SUPERFAMILY Ubiquitin-like 1 79 IPR029071 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2498 1 75 Cytoplasmic Ribosomal Protein Gene Family AT1G23410 33.333 9.49e-07 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2498 K03873 - gmx:100499885 196.438