Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2494 ATGTCAGCTACAGGATCATGGAGTGCTAAGGACAACAAGGCCTTTGAAAGGGCTCTAGCAGTTTATGACAAGGACACCCCTGACCGTTGGAACAATGTTGCCCTTGCTGTTGGTGGGAAAACCCCTGATGAAGTCAAAAGGCACTATGAGCTCCTCCTCCAAGACATTACTCAAATTGAATCAGGCCAAGTTCCATTCCCAAAGTACAAGAAAACTGTTGAGTCTGAGGAAGAGGAGAAAAGGCTGAAAAACCTGGAGCTGCAGTGA 267 0.4682 MSATGSWSAKDNKAFERALAVYDKDTPDRWNNVALAVGGKTPDEVKRHYELLLQDITQIESGQVPFPKYKKTVESEEEEKRLKNLELQ* 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2494 88 ProSiteProfiles Myb-like domain profile. 1 53 IPR001005 -
Pvu7g2494 88 Pfam Myb-like DNA-binding domain 4 50 IPR001005 -
Pvu7g2494 88 Gene3D - 1 66 - -
Pvu7g2494 88 SMART sant 3 55 IPR001005 -
Pvu7g2494 88 CDD SANT 6 53 IPR001005 -
Pvu7g2494 88 PANTHER TRANSCRIPTION FACTOR MYB/SANT FAMILY-RELATED 1 88 - -
Pvu7g2494 88 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 88 IPR044636 GO:0003700
Pvu7g2494 88 SUPERFAMILY Homeodomain-like 6 60 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2494 Pvu-Chr7 48190783 48192713 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pvu7g2494 Myb_DNA-binding 7.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2494 - - gmx:100777923 126.331
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g1252 1 33981178 33982220 Pvu7g2494 7 48190783 48192713 PCT