Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2484 ATGGGCGTTGAGAACTACCACGTGATTGAACTGGTAGGCGAAGGTTCATTCGGGAAGGTATACAAGGGAAGGCGCAAGCACACGGGGCAGACCGTTGCGATGAAATTCATAATGAAGCACGGGAAAACTGAGAAGGACATTCACAATTTAAGGCAGGAAATCGAGATCTTAAGAAAGTTGAAGCATGGAAATATTATTCAAATGCTTGATTCCTTTGAAAGCCCGCAAGAATTTTGTGTCGTTACAGAATTTGCACAAGGTGAGCTATTTGAGATTCTTGAGGATGATAAGTGCCTTCCGGAAGAGCAAGTTCAAGCAATTGCAAAGCAATTGGTAAAAGCTTTGCATTATTTGCATTCCAATCGGATCATCCATCGCGATATGAAGCCCCAAAATATTCTGATTGGTGCTGGATCTGTTGTCAAGCTTTGTGATTTTGGGTTTGCACGTGCAATGTCCACAAATACAGTTGTTTTGCGTTCTATAAAAGGCACCCCGTTGTACATGGCTCCAGAGCTAGTCCGTGAGCAACCATACAACCACACTGTAGATTTATGGTCTCTTGGTGTCATACTGTACGAGTTATTTGTTGGCCAACCACCATTTTACACAAATTCTGTATATGCTCTCATCAGACACATTGTGAAGGATCCTGTTAAATATCCTGATCGCATGAGTCCAAATTTCAAAAGCTTTTTAAAGGGTTTGCTTAACAAGGCACCGGAAAGTCGACTAACTTGGCCGGCTCTTCTTGAGCACCCATTTGTTAAAGAAGCCTCTGACGAACTTGAGGCCAGGGAATTGCGAGAGATAAATGGTTCACGCATGCGCAATGGTGCAGAACGGATGGTTGAAGGGAAAACCATTCAGACTCCAACAGGCAAAAACAATCACATGGTAGGTGCGGAAAGGCATATTGCTTCACCGCTTCAGAGTGAAGCTCAGTTAAATGGTCCTAACTTAGACAGAACTAATTCTTCAGTGCTTGATGAGTCCCCGGTATTTTCAGATCAAAATATAGGAGACACAGGCTGCCAAAGATTGGACAGACTTGAAAATAACTCTCGCACAGTCAAAAGTGCAAAAATAATTGGTCAAGATAATGAAGCGTTGGCACATATTTTGCTACCACTGAAGAAGTGGTCAAAAGGATCTCAAAATATTTGCAGTGATCAAGATGTTCCTCAATCAAATCAGTCATTGAGGATTCTCTCAAACCTCGTTGCAGCTGGTGCCTTCAATTCTAGTGGACGAATAGATGAACTAATAAAAGAGCTCCTTGTGTTTACTGGATCTGTTATAGCCATTAAGTCTTCTGAAGTTATTGACATGATGGCAAAGGGTTTCTCCATCACTAAGATTTTGCTAGATAATGGAGGAAGTTGCCCATCAAGCTCTTATCTAAGTCACTGGGTTGAATTTGTTGATATATATTCTCAGGTTGTAGCATCAAATAATGATGCATCTGGAAGAGTTCTTTATGAATCCAGTGCCTGCATTACAGTCATGCTGTCTAGAGTTGCTCAAGTGGTTAAGTCATCTTCTCAAATTTCAGGCCAAGAGACACTGAATGAAACAGCTAGCAGAATTTTAGACCACGCAAAAACAATGGGTTTAGTGGACCATCTATGTCTGTGTTTAGCCACTTCAGGTTCAAGTCTTATTTCAGGTTCTTCCAACATGCTAAGGGCTGCTTCTGAAGCATGCAGAGCTATGTGGTCTTTGATTAATGCACTGGATATTCTTTTTATGAAAAAAAGTGCCATTTTGTTTCCCATTAATGCTTTGCGCAGTCATTCTTTGCATCGGATGGAAGTTGTGCAACATGAGCAAAATCTCTTGGACAAAGCAGATTCAACTAAAGTTGTTGATGCAATGACAAGAGCATTCCTTAGATCAAAAGCTGTTCAGGTTGCTGTTTACTATTGTTTTCACCAACGACTTGAGTCTGCAATGAGTTGTTGTCTTCAGCTTTTGTCTAGGTGCTGCCTACACAATGAACTTGTTCCAGCTCTTCTTTGTGGCCTTCCCAGTTCCCTTCCAGTGACTACTGTTGTTAGTGGGGGTGGTGATGGAACTATTGTTTCAGAAGTTTTCACTGTTTTATCATTATGCGGTTCCTCTGTTAACAAAGACGCTCAGAGTATGGAACCAAGTAATGTAAAGTGCAAATTAACAAATCCTTCTGCTCTAGTTCGTCATTCATGTCTTGTTCTCGCAATAATTGCTCAGTGTTTGAAGTCAACTGGAAGAAATTCAGCAATGTTTATGCTCACTACCGCACCAAAGAAGCAGCATGCTCGACTTACAGTGCTTTCGCATCATATTACTTCTGATGATAAAATAAAAACCTCTATCGAACCTCAAAGTGCATCAGCCATATTGGCTTTGGCATCCATTCTATCTCTCGAATCTGGGGCTTTAGTTGAGTCTCCAATATCTGAAATTGCAATGCCTTTAATTCCTCGAACCTCTACACTAAGTGATCATCTTAAATTTTCATCTGGCAATGAAAATGAATTGGACCCTTGCAACTTCAGTGGGAAACTCTCATATTGGCAAGGGGTAAGAGATGGGTATGTTGGCCTTTTAGATTCCAGACTCAAGTGGGGAGGACCATTAGCTGTTCAGCAGTTGTGTGCAAGTGGCACTCCTCTACTTCTTATGGGCTTATTAGGAAATGATGGTTTTAATGCTTCTCATGGAAATGATCATCTAAGTGATAGAGTTGGATTGTCTCCTATTGGTGTTGTATGGACAATTTCATTATTATGCCATTGTCTTTCTGGCGGTGCTTTGATATATCGTCAAATTTTGATTAAGAATGAACATATTAAGCTCATTTCCAACTTGATATGTGATGTTCATATCAAGTTGGTGAAATGCTGGATCGGACCTGGTGGAGGGAGAGCAGGAGTCAGAGATCTAATAAATGCTGTGATAGATATTTTAGCATTTCCTTTTGTTGCTCTGCAAAATGCACCTGGCTTGCCTTCCGCCACTGCTTCTGTCAACAGTGGATTTCTTCTTAATATGGGCTCCTCTGGTCAGAGAGTATGCATGGAAGATAAGGGTATAATTAAGGCAATTGAAGAAGACATGGGAAAATATATTAAGATACTTGCAGAGGTTGGTGTGCCTGGTATCATCCTTCGGTGTGTAGATTATATGGATTTGAATGATTTGGGCAGGCCTATTGCATTTCTAGCTAAGATGGTCTGCCACCGACCTTTGGCAATCCAACTCGTGAGTAAAGGTCTTTTGGATCCAAATAGGATGAGAAAGTTGTTTGACTGTTCGGGCCCAAAAGAGGTCACACTGGATGCTCTTATGATTATTTCCGATCTTGCTCGCATGGACAAGGGATTCTATGAGTACATTAAAGGTGCTACTATTTTGGAGTTCTTGAAAGATTTTCTTTCGCACGAGGATCCCAATATGCGTGCCAAAGCTTGCAGTGCTCTTGGAAACATGTGTCGTCATAGTGCCTATTTTTATAGTTCACTTGTTAGACATCAAATTGTTGGTATCCTTATCGAAAGATGTTCTGATCCAGACAAACGAACACGAAAGTTTGCTTGTTTTGCTATTGGAAATGCGGCTTACCACAATGACTTGTTGTATGAGGAGCTGAGGAGATCGATTCCTCATTTAGCAAATTTGTTACAAATAGCCGAGGAAGATAAGACTAAGGCAAATGCAGCAGGTGCACTTAGTAATCTCGTTCGTAACTCTGACAAACTTTGTGAAGACATCGTGTCTAAAGGAGCGGTTCAGTCTCTGCTGAAATTAATATCCGATTGTGCGGTATCGGCACTAAATCCAGGCAGAAATGATTCGGGAAACGAATCTCCACTTAAGATCGCTCTGTTTTCCCTGGCAAAGATGTGTGCACATCCACTCTGCAGACAGTTCATCCGTTCATCGCCATTGTTTCCTGTGATTGGAAGGCTTAAGCAGTCTCCAGAATCATCCATAGCCAAATATGCGTCCGTGATCATTGGTAAAGTTGCTGAACCTTGA 4023 0.4131 MGVENYHVIELVGEGSFGKVYKGRRKHTGQTVAMKFIMKHGKTEKDIHNLRQEIEILRKLKHGNIIQMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQAIAKQLVKALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSTNTVVLRSIKGTPLYMAPELVREQPYNHTVDLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDRMSPNFKSFLKGLLNKAPESRLTWPALLEHPFVKEASDELEARELREINGSRMRNGAERMVEGKTIQTPTGKNNHMVGAERHIASPLQSEAQLNGPNLDRTNSSVLDESPVFSDQNIGDTGCQRLDRLENNSRTVKSAKIIGQDNEALAHILLPLKKWSKGSQNICSDQDVPQSNQSLRILSNLVAAGAFNSSGRIDELIKELLVFTGSVIAIKSSEVIDMMAKGFSITKILLDNGGSCPSSSYLSHWVEFVDIYSQVVASNNDASGRVLYESSACITVMLSRVAQVVKSSSQISGQETLNETASRILDHAKTMGLVDHLCLCLATSGSSLISGSSNMLRAASEACRAMWSLINALDILFMKKSAILFPINALRSHSLHRMEVVQHEQNLLDKADSTKVVDAMTRAFLRSKAVQVAVYYCFHQRLESAMSCCLQLLSRCCLHNELVPALLCGLPSSLPVTTVVSGGGDGTIVSEVFTVLSLCGSSVNKDAQSMEPSNVKCKLTNPSALVRHSCLVLAIIAQCLKSTGRNSAMFMLTTAPKKQHARLTVLSHHITSDDKIKTSIEPQSASAILALASILSLESGALVESPISEIAMPLIPRTSTLSDHLKFSSGNENELDPCNFSGKLSYWQGVRDGYVGLLDSRLKWGGPLAVQQLCASGTPLLLMGLLGNDGFNASHGNDHLSDRVGLSPIGVVWTISLLCHCLSGGALIYRQILIKNEHIKLISNLICDVHIKLVKCWIGPGGGRAGVRDLINAVIDILAFPFVALQNAPGLPSATASVNSGFLLNMGSSGQRVCMEDKGIIKAIEEDMGKYIKILAEVGVPGIILRCVDYMDLNDLGRPIAFLAKMVCHRPLAIQLVSKGLLDPNRMRKLFDCSGPKEVTLDALMIISDLARMDKGFYEYIKGATILEFLKDFLSHEDPNMRAKACSALGNMCRHSAYFYSSLVRHQIVGILIERCSDPDKRTRKFACFAIGNAAYHNDLLYEELRRSIPHLANLLQIAEEDKTKANAAGALSNLVRNSDKLCEDIVSKGAVQSLLKLISDCAVSALNPGRNDSGNESPLKIALFSLAKMCAHPLCRQFIRSSPLFPVIGRLKQSPESSIAKYASVIIGKVAEP* 1341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2484 1340 ProSiteProfiles Protein kinase domain profile. 6 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g2484 1340 SMART arm_5 1204 1243 IPR000225 GO:0005515
Pvu7g2484 1340 SMART arm_5 1244 1298 IPR000225 GO:0005515
Pvu7g2484 1340 SMART arm_5 1120 1160 IPR000225 GO:0005515
Pvu7g2484 1340 Coils Coil 40 60 - -
Pvu7g2484 1340 Pfam Protein kinase domain 6 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g2484 1340 Gene3D - 1068 1337 IPR011989 -
Pvu7g2484 1340 Gene3D Transferase(Phosphotransferase) domain 1 2 313 - -
Pvu7g2484 1340 PANTHER PROTEIN KINASE RELATED 1 1338 IPR045193 GO:0004674
Pvu7g2484 1340 SMART serkin_6 6 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g2484 1340 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Pvu7g2484 1340 Coils Coil 1208 1228 - -
Pvu7g2484 1340 SUPERFAMILY ARM repeat 1033 1337 IPR016024 -
Pvu7g2484 1340 ProSitePatterns Protein kinases ATP-binding region signature. 12 39 IPR017441 GO:0005524
Pvu7g2484 1340 SUPERFAMILY Protein kinase-like (PK-like) 4 257 IPR011009 -
Pvu7g2484 1340 CDD STKc_STK36 4 256 - -
Pvu7g2484 1340 Pfam HEAT repeats 1134 1238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2484 Pvu-Chr7 48082262 48095312 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2484 1 269 AGC Kinase Gene Family AT3G08720 37.906 4.35e-47 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK ULK_Fused Pvu7g2484 Pkinase 4.7e-78 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2484 K06228 - gmx:100792102 2367.42