Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2483 ATGACATTCAATAGGAACAGTGAAGATTGTTTGAGGCTGTTTGGTGTCAACATTGTTGCAAAGAAACCTGTAACTGCTGCTGATGCAGAGAAGGACCTTAATGGAGCCAAAAGTTATATCTTTCTTCAAAGACGACATGCCTTCCATGACAAGAAAAATAAAGGGAAACCATGGACTGAGGAAGAGCACAGGTACTTCTTGTGTGGTTTAAAGAATGTTGGAAAAGGTAACTGGAAAGAGATCTCAAAGAATTATGTGAGAACAAAGACTCCAACACAAGTTGCTAGTCATGCACAAAAGTATTTTCTCAGAATGAGTGCTTTTGAGACAAGAAAACGCAGAAGAAGCCTCTTTGACATTCCACTT 366 0.3907 MTFNRNSEDCLRLFGVNIVAKKPVTAADAEKDLNGAKSYIFLQRRHAFHDKKNKGKPWTEEEHRYFLCGLKNVGKGNWKEISKNYVRTKTPTQVASHAQKYFLRMSAFETRKRRRSLFDIPL 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2483 122 PANTHER TRANSCRIPTION FACTOR KUA1 8 120 - -
Pvu7g2483 122 ProSiteProfiles Myb-like domain profile. 50 102 IPR001005 -
Pvu7g2483 122 SMART sant 54 104 IPR001005 -
Pvu7g2483 122 CDD SANT 57 102 IPR001005 -
Pvu7g2483 122 SUPERFAMILY Homeodomain-like 52 106 IPR009057 -
Pvu7g2483 122 Pfam Myb-like DNA-binding domain 56 102 IPR001005 -
Pvu7g2483 122 ProSiteProfiles SANT domain profile. 58 106 IPR017884 -
Pvu7g2483 122 PANTHER TRANSCRIPTION FACTOR KUA1 8 120 - -
Pvu7g2483 122 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 50 106 IPR017930 -
Pvu7g2483 122 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 54 104 IPR006447 GO:0003677
Pvu7g2483 122 Gene3D - 56 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2483 Pvu-Chr7 48077521 48081112 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pvu7g2483 Myb_DNA-binding 6.9e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2483 - - pvu:PHAVU_007G241200g 255.373