Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2479 ATGAATGCTTCAAAGCCCTATAGGAAAAGGCATGAAGAATTGAAACGCTGGAAGGTGAACCGAGCAGTGGTGACATTTAGGAACTTGTTTCACAAGCTAATGCATCAATACAAAGTGTACGAACCTGGGAATTCTAAGGTTAAGACAAAAGCTCTGATGGAGACAGCAAGGACAATGAGAAGAGAACATCAATGGGAAAACACTCAAAAGTGTGTGGGGCATATACTAGGAATCGATGTCGGTGATGTCTTTCAGAACAGGGCTGAACTCAATGTCATTGGTCTCCATAGACAATTTTGGAATGGGATTGATTTTAAGGTAATGGACAATAGTTTGTTGGCCACAAGCATTGTAGTAACGGATCGCTATGATAATGCTATGAAATCTAATGGTACCTTGGTTTATGAAGGTCAAGGAGGAAATCCTAATGTTGGGAGAAATGTTTCACTTATTGATCAAACATTGAAAGGAGGAAATTTGGCGCTGAAAAATAGCATGCAAACTAGAAGTCCCGTGAGGGTTATTTTGAAAGTTTGTGAAAAGTTTGATGGTGAGTTCAGTAACACTGGCAACGATTCTCATTACTCATATGTGTATGATGGTTTGTATTTGGTGGATACAATGAAAATAGAAAGAGGGAGATTTGGAAAGCTTGTGTTCAAGTTTACACTAAATAGAATTTTAGGACAACCCGAAACTTGTGTTTCCCTTAAGGACCATGGCGAAGCTTCAAGGCAACTTGCAAGTTTTACTCCTAGGAAGAAACACAAACTGAAAGGTTGTGTAGCTCAAAAAGAGGTTGTTCGCATTAAAGATCTTTCAAATGGTGGCGAGAAGTTTAGTGTTAGGGTGGTGACTTCAAGTGATTGCGTTCAGCTACCCACATCCTTTGATTATGTTGTAAATAACATTTACTCAAACAAATTCAAGCAGGAAATTCTGTGTGGCTGTGATTGTGCAGATGGGTGTGTTGACAAAGAAAGTTGTGTCTGCTTCAGGAAGAATGGTAGCAGAATGCCGAATGATTGTAATAAAAGACTCGCTTCTGACATGGAATCATCACTTACATATGAGTGTGGCCCATCGTGCAAGTGCTGCTCTTCTTGCATCAACCGAGTAACTCAGCATGGCATTCAGTTTCAGCTTGAAATCTTCTTGACAGAACTGAAAGGTTGGGGTGTTAGAACACGCTCTTTCATTCCCTCTGGAAGCTTTGTATGTGAGTATATTGGAGAAGTGAGTGACTATATGGAGGCTAGATGGAGGCTAGATGATGACTATATATTTCACATGGGTGTTGGAAAGGTCTTCATTAATGCAGGTAAATGTGGAAACATCGGAAGGTTTTTAAATCATAGTTGTTCTCCAAATCTCTGTGTCAAAGATGTTATGTATGATCACAAAGACAAGAGCCTTCCTCACAAAATGATGTTTGCTGTAAGGGACATTGCTGCTGGTAGAGAGCTGACTTATGATTATAATGTCTCCAATGGAAAATTGATCAAGTGTAAGAGTAATAGCTGCTACTGTGGGACACCTGAATGCAATGGACAGATCTACATTTAA 1566 0.3966 MNASKPYRKRHEELKRWKVNRAVVTFRNLFHKLMHQYKVYEPGNSKVKTKALMETARTMRREHQWENTQKCVGHILGIDVGDVFQNRAELNVIGLHRQFWNGIDFKVMDNSLLATSIVVTDRYDNAMKSNGTLVYEGQGGNPNVGRNVSLIDQTLKGGNLALKNSMQTRSPVRVILKVCEKFDGEFSNTGNDSHYSYVYDGLYLVDTMKIERGRFGKLVFKFTLNRILGQPETCVSLKDHGEASRQLASFTPRKKHKLKGCVAQKEVVRIKDLSNGGEKFSVRVVTSSDCVQLPTSFDYVVNNIYSNKFKQEILCGCDCADGCVDKESCVCFRKNGSRMPNDCNKRLASDMESSLTYECGPSCKCCSSCINRVTQHGIQFQLEIFLTELKGWGVRTRSFIPSGSFVCEYIGEVSDYMEARWRLDDDYIFHMGVGKVFINAGKCGNIGRFLNHSCSPNLCVKDVMYDHKDKSLPHKMMFAVRDIAAGRELTYDYNVSNGKLIKCKSNSCYCGTPECNGQIYI* 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2479 521 SMART preset_2 270 364 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Pvu7g2479 521 ProSiteProfiles Post-SET domain profile. 504 520 IPR003616 -
Pvu7g2479 521 SUPERFAMILY PUA domain-like 56 237 IPR015947 -
Pvu7g2479 521 Pfam SAD/SRA domain 72 230 IPR003105 -
Pvu7g2479 521 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 9 517 - -
Pvu7g2479 521 Gene3D SET domain 262 520 IPR046341 -
Pvu7g2479 521 SUPERFAMILY SET domain 262 502 IPR046341 -
Pvu7g2479 521 Pfam SET domain 423 494 IPR001214 GO:0005515
Pvu7g2479 521 SMART set_7 380 500 IPR001214 GO:0005515
Pvu7g2479 521 SMART G9a_1 68 230 IPR003105 -
Pvu7g2479 521 Pfam Pre-SET motif 274 372 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Pvu7g2479 521 Gene3D - 54 252 IPR036987 -
Pvu7g2479 521 ProSiteProfiles Pre-SET domain profile. 315 377 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Pvu7g2479 521 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH6 9 517 - -
Pvu7g2479 521 ProSiteProfiles YDG domain profile. 73 226 IPR003105 -
Pvu7g2479 521 ProSiteProfiles SET domain profile. 380 494 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2479 Pvu-Chr7 48059864 48063114 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2479 51 519 Su(var)3-9 homologs AT1G73100 33.333 9.30e-77 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pvu7g2479 SAD_SRA 5.3e-38 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2479 - - vun:114192587 850.892
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2479 7 48059864 48063114 Pvu7g2479 7 48059864 48063114 ECH