Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2460 ATGCATGACATTTGTCTCAACATGCCACCAATGGTTCAGAACTTCGACCCTGAGGACCTCTTCTCAAGGCGTTGCATTTGGGTGAATGGACCTGTGATAGTTGGTGCTGGTCCTTCAGGTCTTGCAGTGGCTGCAGGCCTCAAAGACCAAGGTGTTCCATTCATAATCCTTGAGAGAGCAAACTGCATTGCCTCTCTTTGGCAAAACCGCACCTATGATCGCCTCAAGCTTCACCTCCCCAAACAGTTCTGCCAGCTTCCAAACTTCCCTTTCCCTGAGGACTTCCCTGAGTACCCCACAAAGTTTCAGTTCATTAGCTACCTTGAGTTATATGCCAAGCACTTCAACATAGCCCCACAGTTCAATGAAACAGTGCAGTCTGCAAAGTATGATGAGACCTTTGGCCTGTGGAGGGTCAAGACCATCAGGAGGAAAGGGCCCTCCTTTGGTGCTGAGTGTGAGGTTGAGTACATTTGCAGGTGGCTTGTGGTTGCCACTGGTGAAAACTCAGAGAAAGTGGTGCCTGAGTTTGAAGGGTTGGGAGAGTTTGGTGGCCATGTCACGCATGCTTGTGAATATAAATCAGGGGAGGGTTTTGGTGGACAGAAAGTGCTTGTTGTTGGCTGTGGAAATTCAGGAATGGAAGTCTCACTTGATCTATGTAACCACAATGCAAAACCATCGATGGTGGTTAGAAGCTCAGTTCATGTTTTACCAAGAGAGGTTTTTGGGAAATCTACTTTTGAAGTTGCTGTGATGTTGATGAAGAGGCTACCTCTTTGGATGGTTGATAAGATATTGCTGATTCTGGCACGTTTGACTTTGGGGAATGTTGAAAAGTATGGTCTCAAAAGGCCTTCAGTGGGTCCTTTGGAATTCAAGCACACTGCAGGGAAGACCCCTGTGCTGGACATTGGGGCCCTTGAGAAAATTAGATCTGGCAAAATCAAAGTGGTTCCTGGAATCAGAAGGTTCTTGCCAGGGAAAGTGGAACTTGTTGATGGCCAAGTTCTTCAGATTGATTCTGTGGTTCTTGCCACTGGTTATCACAGCAATGTACCATCATGGTTGAAGGAAAATGAGTTTTTCTCCAATGATGGGATTCCAAGAAACCCTTTTCCAAATGGGTGGAAAGGCAAAGGTGGTCTTTATGCAGTTGGATTCACAAGGAGAGGTCTTTCTGGTGCTTCTTTGGATGCAATCAATGTGGCTCATGACATTGCCAAGAGTTGGAAAGAGGAAAACAAACAGAACAGAAAAACTGTGGCTGCACGCCACAGGAGGTGCATATCACACTTCTAA 1302 0.4624 MHDICLNMPPMVQNFDPEDLFSRRCIWVNGPVIVGAGPSGLAVAAGLKDQGVPFIILERANCIASLWQNRTYDRLKLHLPKQFCQLPNFPFPEDFPEYPTKFQFISYLELYAKHFNIAPQFNETVQSAKYDETFGLWRVKTIRRKGPSFGAECEVEYICRWLVVATGENSEKVVPEFEGLGEFGGHVTHACEYKSGEGFGGQKVLVVGCGNSGMEVSLDLCNHNAKPSMVVRSSVHVLPREVFGKSTFEVAVMLMKRLPLWMVDKILLILARLTLGNVEKYGLKRPSVGPLEFKHTAGKTPVLDIGALEKIRSGKIKVVPGIRRFLPGKVELVDGQVLQIDSVVLATGYHSNVPSWLKENEFFSNDGIPRNPFPNGWKGKGGLYAVGFTRRGLSGASLDAINVAHDIAKSWKEENKQNRKTVAARHRRCISHF* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2460 433 PRINTS FAD-dependent pyridine nucleotide reductase signature 31 50 - -
Pvu7g2460 433 PRINTS FAD-dependent pyridine nucleotide reductase signature 159 177 - -
Pvu7g2460 433 PRINTS FAD-dependent pyridine nucleotide reductase signature 203 221 - -
Pvu7g2460 433 PRINTS Pyridine nucleotide disulphide reductase class-II signature 30 52 - -
Pvu7g2460 433 PRINTS Pyridine nucleotide disulphide reductase class-II signature 199 223 - -
Pvu7g2460 433 PANTHER INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA3-RELATED 15 431 - -
Pvu7g2460 433 Pfam Flavin-binding monooxygenase-like 33 354 IPR020946 GO:0004499|GO:0050660|GO:0050661
Pvu7g2460 433 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 15 431 - -
Pvu7g2460 433 Gene3D - 30 419 IPR036188 -
Pvu7g2460 433 SUPERFAMILY FAD/NAD(P)-binding domain 202 411 IPR036188 -
Pvu7g2460 433 SUPERFAMILY FAD/NAD(P)-binding domain 32 235 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2460 Pvu-Chr7 47906858 47909264 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2460 K11816 - gmx:100818345 830.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2460 7 47906858 47909264 Pvu7g2460 7 47906858 47909264 ECH
Pvu1g1743 1 42987726 42989912 Pvu7g2460 7 47906858 47909264 PCT