Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2437 ATGGCGCTGCTTTCTTCTTCTTCTTCTGCCACGTGGCTCCTCTTCTTCCTTCTCGCGCTCTTCGTTCAACTACACGCCATGCCCACCACCACACCGCAGATCTCTCACCTCAGGAATGTTGAAGTGGAAAAACACAGGTTGCCGAGCTTGCAGAACTCGTCAATGGTTGAGAGGGCAAAAGAGGCTGAGAAATTAAATGAAGAAGCTGCAGTGGCTAACCCAGAGGAAGTGGTTTCAATGGTTGAGATGAGCATCCACAATAGTACACAGAGAAGGAATCTGGGGTTTTTCTCCTGTGGAACTGGTAACCCCATTGATGATTGCTGGCGTTGTGACCCTAACTGGCAACGCAACAGGAAGCGTCTTGCAGATTGTGGCATTGGTTTTGGCAGAAATGCCATTGGTGGTCGTGATGGCAAGTACTATGTTGTGACTGATCCCAGGGATGATGACCCTGTGAACCCCAAACCTGGCACTCTTCGCCATGCTGTGATCCAGGACAGGCCCTTGTGGATTGTGTTCAAGAGGGACATGGTTATTCAGTTGAAGCAAGAACTAATCATGAACAGCTTCAAGACCATTGATGGAAGGGGAGCCAATGTGCACATTGCTAATGGGGCATGTATCACAATCCAGTTTATTACCAACGTCATCATCCATGGCCTGCATATTCATGATTGCGTACCTACGGGAAATGCCATGGTGAGGAGCTCACCCACCCACTTTGGTTGGAGGACAATGGCTGATGGAGATGCCATCTCCATATTTAGCTCAAGCCACATTTGGGTTGACCACAACTCCTTGTCCCACTGTGCTGATGGCCTTGTGGATGCTGTCTTGGGCTCAACAGCCATAACTATTTCAAACAACCACTTCACCCACCACAACGAGGTGATTCTGCTGGGCCACAGTGACTCTTACACAAGAGACAAGCTCATGCAAGTGACCATCGCATACAACCATTTCGGAGAGGGACTAATCCAGAGAATGCCACGGTGTAGACATGGATATTTTCACGTGGTGAACAATGACTACACTCACTGGGAAATGTATGCTATTGGTGGAAGTGCTAACCCCACCATTAACAGCCAGGGCAACCGATACAATGCTCCTGTTAACCCTTTTGCCAAGGAGGTGACTAAGAGGGTGGAAACAGCACAAACTCAGTGGAAGGGTTGGAATTGGAGGTCTGAGGGAGATTTGTTGCTGAATGGTGCCTATTTCACCCCATCAGGAGCTGGAGCCTCAGCCAGCTATGCTAGGGCCTCAAGCTTAGGAGCCAAATCATCTTCCATGGTTGGTTCCATGACTTCCAATGCTGGTGCACTCGGTTGCAAAAGAGGCCGTCAGTGCTAG 1356 0.4934 MALLSSSSSATWLLFFLLALFVQLHAMPTTTPQISHLRNVEVEKHRLPSLQNSSMVERAKEAEKLNEEAAVANPEEVVSMVEMSIHNSTQRRNLGFFSCGTGNPIDDCWRCDPNWQRNRKRLADCGIGFGRNAIGGRDGKYYVVTDPRDDDPVNPKPGTLRHAVIQDRPLWIVFKRDMVIQLKQELIMNSFKTIDGRGANVHIANGACITIQFITNVIIHGLHIHDCVPTGNAMVRSSPTHFGWRTMADGDAISIFSSSHIWVDHNSLSHCADGLVDAVLGSTAITISNNHFTHHNEVILLGHSDSYTRDKLMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYNAPVNPFAKEVTKRVETAQTQWKGWNWRSEGDLLLNGAYFTPSGAGASASYARASSLGAKSSSMVGSMTSNAGALGCKRGRQC* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2437 451 Gene3D - 102 444 IPR012334 -
Pvu7g2437 451 PANTHER PECTATE LYASE 18-RELATED 17 448 IPR045032 GO:0030570
Pvu7g2437 451 SUPERFAMILY Pectin lyase-like 77 445 IPR011050 -
Pvu7g2437 451 PRINTS Pollen allergen Amb family signature 125 142 IPR018082 -
Pvu7g2437 451 PRINTS Pollen allergen Amb family signature 149 174 IPR018082 -
Pvu7g2437 451 PRINTS Pollen allergen Amb family signature 185 201 IPR018082 -
Pvu7g2437 451 PRINTS Pollen allergen Amb family signature 249 270 IPR018082 -
Pvu7g2437 451 PRINTS Pollen allergen Amb family signature 329 348 IPR018082 -
Pvu7g2437 451 PRINTS Pollen allergen Amb family signature 351 370 IPR018082 -
Pvu7g2437 451 PRINTS Pollen allergen Amb family signature 393 417 IPR018082 -
Pvu7g2437 451 PRINTS Pollen allergen Amb family signature 422 445 IPR018082 -
Pvu7g2437 451 Pfam Pectate lyase 184 366 IPR002022 -
Pvu7g2437 451 PANTHER PECTATE LYASE 17 448 - -
Pvu7g2437 451 SMART amb_all 177 374 IPR002022 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2437 Pvu-Chr7 47764165 47769476 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2437 33 451 Polysaccharide Lyase AT4G13710 78.538 0.0 712
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2437 K01728 - gmx:100781845 832.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2437 7 47764165 47769476 Pvu7g2437 7 47764165 47769476 ECH