Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2434 ATGGCAGAAGATATGAAAATTGATCAAATTGTGGAAGTTCCTGATACCCCAGATAGAATAACTGTGAGGGGTGATGATCAGAAACGTTTATGTAATCCTGAGAAGAGGGGCAGAGCTCTTAACGCTGCAGTTGAAATGAATAATAGTACCTGTACCACATCATCCCCCTCAGAGAAATCTTATCCTTCTCAAAATGCTCCCATCTTTAGGAGAGGCCAAACAAAACATTCTAATGGAGCTGAAAAGATGGAGAAAGGGAAAAATATAAGCTCCAAGGTTTCCTCTAAATCATCTCGCCGTGGTATTTCTGTTTTAGATTTGACGGAAGAGAATGGAGCAAGCCAACAACTGAAACCAGCTTTCTCACTTGGTGCATCAAGAGATCATGCAACTGAAGCCAAGAAAGCACCCAAAGCAACTATTGGGAACTCTTTGTTGCCAGCCATTTCGGATTCTTCTGTTACATCTAGAAATCCCTTCACTGGAATCTGTAAACTTCCAGGTTCTAATACATCTGTGGACCGTGGCAAGGGTATTTCTCTGTCTCGTGATTCTCAATCCCAAAATGAAAAGCAAGTGTCTTTGCCTCCATTTGTTTCCACCTCTCCACAAGGTAGAGGGCACAAGAGATTGGTGCGAAATGGGTGCATTTTACCTATCAATATTGCAACGAGGGCTAAACAATTAGCTGAACAGAGAAACCTTCAAACTGAAGATGTTCAACAGAGCCACGCTGATCATGTGCTTTCTAGCAATACAGTGTCACCAAATAGTGTTGATGACATAGTTGCTAGAGAGAGATGCAATGGTAGAGGTAAAGGAAAGGAAGTACTTATTCCTCCTCCATTCAATGGACGCAATGCTGGAACCTTTTGCACTGCTAGCAGCAGCCCTGTCATCAATCATGAAGAGGTCACTGGTACCAGTAATGATACAAGAAATTCACTTCAATACTCTGGGGGACAAGGTGGTTGGAGAACTACTCATAATGAGAGGAATGCTAATCAGCACTTGTATGATGTACATGGGCATCCTAGAAATAATGGTGTTGGAAGATGTTTTAATAGACGGAATACATACCTAGTGAATGGAAGAAACATTGGGAGTGATCAAAGCTGCACACGTGTACATGGTTCTCAATCAGATCATACAGCTCAACCAATTTCTGTGATTATTCCAGATGTGGAACAGCTGTCTGTTAACCGTCCTACTGCTGACATTCTGAGTAAAAGACAAAGAAAACGTGAATCATCTGGGGAATCATCAAGTTCATATCCGGAAGTGGTAGAGTTGTTATCAACACCAAGGAACTCAGCAAGCTCATCCCGGAGCCGTGTCTTGGATCCTGAAGTGGTTGAGTTGATGTCCACACCAAGGTACAAATCATCTGAAGATTTAGATGATAATGACAATAATAGCTTGGAAGCTCGGGCCAGACAAGTGGAAGCAGATGAGATATTGGCACGAGAACTCCAAGAACAATTGTATCATGATGATTCTATTGAAGACAGAGGGATTGATGAACATTTAGCGTGGGAGTTGCAGCATGCAGAGGATAGTCTGCCTACATCCATTGATAGCCACAGCAGAAATCATCCTGTACGTTTTCCTAGGGCAAACAGACAGCCTCGTATATTGCCTAATCAGAGTTCTTCCAGAAGGAGACCTGAGCCTCTAGCTTTCTCTAATAGAATGGCACGGTTGAGGAGTCGCGCCACAAGTAGGACTCGGGCATCTAACATATCATCTAGAGGAAGAAGCCCCCAGTTTCCTCTGGATATGGACTTGGACATGAGACTTGATATATTAGAAGCTTTGGAGAATTCAATGGGGGATTTCAGTGATATGGGAGTGGTTGATGGCATCTTTAATGCGGGACGTGATTTCAACGCAAGTGACTATGAAATGTTATTGGCCCTTGATGAGAGAAATCACCAACATACTGGTGCATCTACTAATATGATCAATAGCCTTCCGCAGTTAACAATCCAGAATGACAACATGACAGAGCCATGTGCTATATGTCTTGAGACCCCAGCCAGGGGAGAAACTATTCGCCACCTTCCCTGTTTGCACAAATTTCACAAAGATTGTATCGATCCTTGGCTCCAGAGGAAAACAACATGCCCCGTGTGCAAGTCATCAATCACCTAA 2154 0.4304 MAEDMKIDQIVEVPDTPDRITVRGDDQKRLCNPEKRGRALNAAVEMNNSTCTTSSPSEKSYPSQNAPIFRRGQTKHSNGAEKMEKGKNISSKVSSKSSRRGISVLDLTEENGASQQLKPAFSLGASRDHATEAKKAPKATIGNSLLPAISDSSVTSRNPFTGICKLPGSNTSVDRGKGISLSRDSQSQNEKQVSLPPFVSTSPQGRGHKRLVRNGCILPINIATRAKQLAEQRNLQTEDVQQSHADHVLSSNTVSPNSVDDIVARERCNGRGKGKEVLIPPPFNGRNAGTFCTASSSPVINHEEVTGTSNDTRNSLQYSGGQGGWRTTHNERNANQHLYDVHGHPRNNGVGRCFNRRNTYLVNGRNIGSDQSCTRVHGSQSDHTAQPISVIIPDVEQLSVNRPTADILSKRQRKRESSGESSSSYPEVVELLSTPRNSASSSRSRVLDPEVVELMSTPRYKSSEDLDDNDNNSLEARARQVEADEILARELQEQLYHDDSIEDRGIDEHLAWELQHAEDSLPTSIDSHSRNHPVRFPRANRQPRILPNQSSSRRRPEPLAFSNRMARLRSRATSRTRASNISSRGRSPQFPLDMDLDMRLDILEALENSMGDFSDMGVVDGIFNAGRDFNASDYEMLLALDERNHQHTGASTNMINSLPQLTIQNDNMTEPCAICLETPARGETIRHLPCLHKFHKDCIDPWLQRKTTCPVCKSSIT* 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2434 717 MobiDBLite consensus disorder prediction 543 557 - -
Pvu7g2434 717 MobiDBLite consensus disorder prediction 406 427 - -
Pvu7g2434 717 Pfam Ring finger domain 672 713 IPR001841 -
Pvu7g2434 717 MobiDBLite consensus disorder prediction 48 72 - -
Pvu7g2434 717 MobiDBLite consensus disorder prediction 166 201 - -
Pvu7g2434 717 CDD RING-H2_PA-TM-RING 672 713 - -
Pvu7g2434 717 MobiDBLite consensus disorder prediction 166 206 - -
Pvu7g2434 717 SMART ring_2 672 712 IPR001841 -
Pvu7g2434 717 MobiDBLite consensus disorder prediction 567 587 - -
Pvu7g2434 717 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 475 715 - -
Pvu7g2434 717 PANTHER - 475 715 - -
Pvu7g2434 717 ProSiteProfiles Zinc finger RING-type profile. 672 713 IPR001841 -
Pvu7g2434 717 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 638 717 IPR013083 -
Pvu7g2434 717 MobiDBLite consensus disorder prediction 75 89 - -
Pvu7g2434 717 MobiDBLite consensus disorder prediction 521 590 - -
Pvu7g2434 717 SUPERFAMILY RING/U-box 656 716 - -
Pvu7g2434 717 MobiDBLite consensus disorder prediction 48 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2434 Pvu-Chr7 47706330 47714580 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2434 3 717 C3H Transcription Factor Family AT1G04790 32.440 3.39e-70 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2434 - - gmx:100796218 880.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2434 7 47706330 47714580 Pvu7g2434 7 47706330 47714580 ECH