Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2426 ATGTTGAAGGCCTTGGAAGCTAGTTCTGAAGGTCAAAGTGTTTTAGATGTTCCTGAAGCACAAATGGTTAGTGAACAGCTTTGGGTAGATAAGTATGCTCCGAAATCCTTTACTGAGCTTCTAAGTGATGAACAAACAAATCGTGAGGTACTCTTGTGGTTGAAGCAATGGGATCCTGTTGTATTTGGATCTGAAATTCGAAGCACATCAGATGATGTTTTGTCTGCTTTGAAACGACATTCTTCTATTGTCCACAATCAGAAACCTTTGAACTCAAAGTTTCCTAGGAAGAATGGAGGACCCAAATGGAATAATGGTGGGAGGTATATAAATTCTGTAAGTATGGATGAGAGTGGCAGTTCAAAGAGTATTCAAGATGCATGGAATACGAAGTCAAGGAATATTAGTCCACCAGAACAGAAGGTCCTTCTGCTATGTGGACCACCAGGTCTTGGAAAAACAACACTAGCACATGTAGCTGCTAGGCATTGTGGATATCATGTGGTAGAGATTAATGCTAGTGATGATCGTTCTACATCAACAATTGAAGCCAAGATTCTTGATGTGGTTCAAATGAACTCTGTCTTGTCTAATTCAATGCCAAAGTGTCTGGTGGTGGATGAAATTGATGGAGCTCTTGGTGATGGTAAGGGTGCTGTGGAGGTTCTTCTAAAGATGATTTCTGCCGAAAGGAAGCCTGATGTGGGGAAACAAACTTTTGGCAAAGGACAAATGCAGAGGAAGTCAGCAAAAAAGGGTTCAAAAACTGCTTCACTTTCAAGACCTGTGATATGCATTTGTAATGATCTATATGCACCTGCCTTAAGACCATTACGTCACGTAGCCAAGGTTCATATATTTGTTCAACCAACAGTTAGTCGTGCAGTGAGCAGGCTGACATACATATGCAACAAGGAGGGAATGAAAGCCAGTGCAATTGCACTCACTGCTCTGGCAGAATATACAGAATGTGATATTAGATCATGCTTGAACACTCTCCAATTTCTCTCGAAGAAGAAAGAAGCACTCAATGTGTTTGATATTGGTTCTCAAGTAGTTGGCCAGAAGGACACGTCAAAGAATGTTATAGACATCTGGAAAGAGATTTTCCATAAGCAAAGAACAAAAAAGATGGAAAGAAAATCTCATAAAGGGAGTTCCTTTGAGTTTGACTCATTGTACACCCTTGTGTCAAAGCGAGGTGATAGTGACTTGATTCTGGATGGAATTCATGAAAATGTTTTGCGACTCAATTATCATGACCCAGTGATGCAGAAAACTGTCAAGTGCTTCAACAATCTTGGAGTTTATGATCTATTGCATCAATACATAATGCATACACATCATATGTCCCTTTATGTATATTTGCCCCTTGTTGCAATTAATGTACATCATATAGTATCTCAAGTTCAGAAACCAAACATTGAGTGGCCAAAGTCACATCAGAGATATCGTACAATGATGATGGAAAAAATGGACATTTTAAATACCTGGCGCCAGAAAATCCCACCGCATATTGGAAGGCACTTGTCAGCAAGTTCCTTTGTAGAAGATTTAATTTCTCCATTGTTACATATTCTGTCCCCGCCAACTATAAGACCGGTGGCATTACAATTACTATCTGATAAGGAGAAAAATGATCTTGCTCAATTAGTTAGCAAAATGGTATCATATGCTATAACATACAAGACTGTGAAATCAGATATGCTGCCTCAAACCTTGAAGTGTGAAGTAGCAGATGGTTTGACACTGTCTCTTGTTCCTCCTATCAGTGACTTTATAAACTTCAAGGATTATACTTCAAATCATTATGTGCTTTCTGTTGCTATGAAGCAGGTTTTGACACATGAGGTTGAAAAGCATAAGATTTTACAAGTTGGTAATGACAAAACTGGAGCTTTAGCAAATGAAGGGCATGAAGTCATTGAGACTAGAACTCACAACATCCCATTAGCCAATGCCAATTATGCAACTGCAGTTGATATGAAAACTAATGAAAATCAGGTTAATGTAGCAAGGAAATTAAATGCAAATCCCACAATAGTTTCATCAAACTTGAATACCGATAAAAGTTCAAGTGCAACAGATAGTGGGAAACCACTAAACATGGGAAATATGAAAAAACCATCCAGAAGTTCTTCCAGTTTCTTTGACAGGTTTAAAAAGGCAAATACTAAGGGCGTACAAAGTAATGACACATCTCAACCGGAAGAAGCTACCTTGCAGAAAGATCAATACCCTTTACTTTTTAAATTTAACGAGGGCTTTACCAATGCTGTCAAAAGGCCGGTCCGTATTCGTGAATTTCTATCTTAA 2316 0.3864 MLKALEASSEGQSVLDVPEAQMVSEQLWVDKYAPKSFTELLSDEQTNREVLLWLKQWDPVVFGSEIRSTSDDVLSALKRHSSIVHNQKPLNSKFPRKNGGPKWNNGGRYINSVSMDESGSSKSIQDAWNTKSRNISPPEQKVLLLCGPPGLGKTTLAHVAARHCGYHVVEINASDDRSTSTIEAKILDVVQMNSVLSNSMPKCLVVDEIDGALGDGKGAVEVLLKMISAERKPDVGKQTFGKGQMQRKSAKKGSKTASLSRPVICICNDLYAPALRPLRHVAKVHIFVQPTVSRAVSRLTYICNKEGMKASAIALTALAEYTECDIRSCLNTLQFLSKKKEALNVFDIGSQVVGQKDTSKNVIDIWKEIFHKQRTKKMERKSHKGSSFEFDSLYTLVSKRGDSDLILDGIHENVLRLNYHDPVMQKTVKCFNNLGVYDLLHQYIMHTHHMSLYVYLPLVAINVHHIVSQVQKPNIEWPKSHQRYRTMMMEKMDILNTWRQKIPPHIGRHLSASSFVEDLISPLLHILSPPTIRPVALQLLSDKEKNDLAQLVSKMVSYAITYKTVKSDMLPQTLKCEVADGLTLSLVPPISDFINFKDYTSNHYVLSVAMKQVLTHEVEKHKILQVGNDKTGALANEGHEVIETRTHNIPLANANYATAVDMKTNENQVNVARKLNANPTIVSSNLNTDKSSSATDSGKPLNMGNMKKPSRSSSSFFDRFKKANTKGVQSNDTSQPEEATLQKDQYPLLFKFNEGFTNAVKRPVRIREFLS* 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2426 771 CDD AAA 138 241 - -
Pvu7g2426 771 SMART AAA_5 139 293 IPR003593 -
Pvu7g2426 771 Gene3D - 25 288 IPR027417 -
Pvu7g2426 771 MobiDBLite consensus disorder prediction 681 714 - -
Pvu7g2426 771 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 26 338 IPR027417 -
Pvu7g2426 771 Gene3D - 290 361 - -
Pvu7g2426 771 MobiDBLite consensus disorder prediction 236 255 - -
Pvu7g2426 771 Pfam ATPase family associated with various cellular activities (AAA) 143 268 IPR003959 GO:0005524|GO:0016887
Pvu7g2426 771 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 2 770 - -
Pvu7g2426 771 CDD HLD_clamp_RFC 290 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2426 Pvu-Chr7 47623507 47643869 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2426 140 353 Core DNA Replication Machinery Family AT5G22010 29.694 5.61e-14 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2426 K11269 - gmx:100785041 1332.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2426 7 47623507 47643869 Pvu7g2426 7 47623507 47643869 ECH