Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2416 ATGGCTGGTGTGAGGGAGCAAGATCAGTACATGCCAATCGCCAATGTGCTAAGGATCATGCGGAAGATTTTGCCACCGCATGCAAAGATTTCTGATGAGGCAAAGGAGACTGTGCAAGAATGTGTTTCTGAGTACATCAGTTTCATCACAGCTGAAGCAAATGATCGCTGCCAGCGTGAGCAGCGCAAGACTGTGACTGCTGAAGATGTGCTGTGGGCTATGGGAAAGCTTGGTTTTGATGAATATGCTCAGTCTCTTTCTGTTTACCTCACTCGCTATCGCCAGAGTGAAGGAGAACGCATGTCTGTGAGGCCTGCTTCAACTTCTGCTCCTCCCTTTGAGATGAACCCTCCTTATCCACCTTACCCTCATGGTTTTGGAATGTTTGATTATGATCCATCACAGTCCATAGCTTCTTCTTCAAGAGCAGCAGGTGGATTTGTTCCCAACTTTGATCCTTATGCTAATCCACCAAAACCTACTGGTGGTAACATGTGA 498 0.4679 MAGVREQDQYMPIANVLRIMRKILPPHAKISDEAKETVQECVSEYISFITAEANDRCQREQRKTVTAEDVLWAMGKLGFDEYAQSLSVYLTRYRQSEGERMSVRPASTSAPPFEMNPPYPPYPHGFGMFDYDPSQSIASSSRAAGGFVPNFDPYANPPKPTGGNM* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2416 165 PRINTS CCAAT-binding transcription factor subunit A signature 38 56 - -
Pvu7g2416 165 PRINTS CCAAT-binding transcription factor subunit A signature 57 75 - -
Pvu7g2416 165 PRINTS CCAAT-binding transcription factor subunit A signature 76 94 - -
Pvu7g2416 165 SUPERFAMILY Histone-fold 7 108 IPR009072 GO:0046982
Pvu7g2416 165 MobiDBLite consensus disorder prediction 140 165 - -
Pvu7g2416 165 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-6 4 113 - -
Pvu7g2416 165 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 4 113 IPR027113 GO:0001228|GO:0006355|GO:0016602
Pvu7g2416 165 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 11 74 IPR003958 -
Pvu7g2416 165 Gene3D Histone, subunit A 2 111 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2416 Pvu-Chr7 47549376 47550100 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2416 4 100 CCAAT-HAP3 Transcription Factor Family AT5G47670 78.351 7.34e-55 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Pvu7g2416 CBFD_NFYB_HMF 8.7e-25 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2416 K08065 - gmx:547959 221.861