Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2411 ATGGAACAACCTCAACTTGGTGCAAGCACTGTGGTTGACCCCAACACTTTCTCCTTTGTTACTTTCACTTCTGAGAGTTGCACCAATGGTGAGCTGCTTTGCATGGGTTCAGCCACTGCCGGCAATGGGTATTTGAGTCTCACCCCAGAGCCACAACAAAGCAGCAACTCAAGCTCAACACTGTCTAACACAACCAGAAATGTTGGAAGGGTTTTGTACCCTCATCCTGTGCCTGCTTGGCCTGCAATTATCTCCACCACATTCACTCTTAGGATCACTCCTTTTTCAGAAAATTCAACCGGCTCTGGGGATGGAGTGGCACTAGTGTTTGCTAATGATAACAGGCCCTCACCAAATGGCTCTTATCTTGGCATGTTTGATCAGTCTACACCAGGTGGGGGTTTTCAACAACTAGCTGTGGAGATGGACACTTTCATGAATGAATTTGAACAAGATGGAAACCACATTGGGATAGTGACAACAAGCATCACAAATCCACTTGCATCTGAGAGTCTCAATAGCAGTGGCATTGACCTCAAAAGTGGAAGAGACATTAAGGTCAAAGTTGACTATGATGGATGGAGTAAAATGATTTTTGTCTCTGTGGGATACCCTGAAAGCCAATTGAAGAATGTCCTTAACCATTCAATTAATCTACCTGACATACTTCCAAGCTCCATTTATGTTGGTTTCACAGCCTCCACAGGCAACACTTTTCCTGAAAGCCACCAAGTCCTCAATTGGGTGTTCACATCAGTGCCACTTCCTTTTCTTTCTGTTGAACACAGTAGAGTTGGCACCATCAAGACCTTATTGGTAATTGTCATGGTATGTTTATTTCCTTTTATCTGGATAGCTTTTTGGAGGAAAAGATATTTGAGGGGTAAAAGGAGGGGGGATATAGAAAGCCTATCAAAGAAGGCTGCAGATATCCCCAAGGTGTTCACTTACAAGCAACTATCAAGGGCAACATGCAAATTCAGCCAGGAAAATCTTTTGGGAAAAGGTGCATTTGGCAGTGTTTATAAAGGAATCATATCAGACTCTAGAAAAACTGTAGCAGTCAAGAAGATTTCAGCAACTTCCAAGCAAGGTGAAAGAGAGTTCTTAGCTGAAATATGTACTATAGGGCGTCTTAGGCACAAAAACTTAGTGAAGCTCCAAGGCTGGTGCATTGAAGGCAAGAATCTTCTCTTGGTTTATGAATACATGGAAAATGGAAGCCTTGATCACTTCATCGGCAAAGGCAGTCTGAACTGGCAAATGAGGCACAAGGTATTGACAGGATTGGCATCAGCATTACTTTACCTTCATGAAGAGTGTGGAAACCCTTTTGTTCACAGAGATGTTAAGCCTAACAATGTCATGTTGGACAACAATCACGATGCTCATTTAGGAGATTTTGGGCTAGCAAGACTACTCAAAAGTGAAGGTTCAGTGACCACAAATCTCAATGGAACTCTAGGATATTTGGCTCCAGAACTAAGCTTTACAGGGAGAGCTACACCTGAATCAGATGTGTATAGCTTTGGCATGGTAGTTCTTGAAGTCACATGTGGGAAAAGGTTAAACTGGATTAAGCAAGGGAACAGTTTTGTAGACTCTGTGTGGAATCTGCATGCAGAAAATGCATTGGTTGAGTGTGTTGACAAACGACTAGAGAACAAATTTGATGAGGAAGAAGCTAAAAGGGCATTGATTGTTGGATTGGCATGTTTGCATCCTGATTCCATGTTGAGGCCAAGGATGAGAAAAGTTGTGAACATTTTTCAGAACCCAAATGAACCTTTAATGCAGTTAGCAGGAGTGAGGCCAACAGGAGTTTATGTATCAGTTTCTTCAAGTTCATCATCCTCCAACTCTGGCTCTAACACTGAGTTACAGCTTCAATCATCCACAACATCATCACATTCAAAATTCAACAGTGTATGA 1932 0.4224 MEQPQLGASTVVDPNTFSFVTFTSESCTNGELLCMGSATAGNGYLSLTPEPQQSSNSSSTLSNTTRNVGRVLYPHPVPAWPAIISTTFTLRITPFSENSTGSGDGVALVFANDNRPSPNGSYLGMFDQSTPGGGFQQLAVEMDTFMNEFEQDGNHIGIVTTSITNPLASESLNSSGIDLKSGRDIKVKVDYDGWSKMIFVSVGYPESQLKNVLNHSINLPDILPSSIYVGFTASTGNTFPESHQVLNWVFTSVPLPFLSVEHSRVGTIKTLLVIVMVCLFPFIWIAFWRKRYLRGKRRGDIESLSKKAADIPKVFTYKQLSRATCKFSQENLLGKGAFGSVYKGIISDSRKTVAVKKISATSKQGEREFLAEICTIGRLRHKNLVKLQGWCIEGKNLLLVYEYMENGSLDHFIGKGSLNWQMRHKVLTGLASALLYLHEECGNPFVHRDVKPNNVMLDNNHDAHLGDFGLARLLKSEGSVTTNLNGTLGYLAPELSFTGRATPESDVYSFGMVVLEVTCGKRLNWIKQGNSFVDSVWNLHAENALVECVDKRLENKFDEEEAKRALIVGLACLHPDSMLRPRMRKVVNIFQNPNEPLMQLAGVRPTGVYVSVSSSSSSSNSGSNTELQLQSSTTSSHSKFNSV* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2411 643 ProSitePatterns Serine/Threonine protein kinases active-site signature. 445 457 IPR008271 GO:0004672|GO:0006468
Pvu7g2411 643 ProSitePatterns Protein kinases ATP-binding region signature. 333 357 IPR017441 GO:0005524
Pvu7g2411 643 SUPERFAMILY Concanavalin A-like lectins/glucanases 20 253 IPR013320 -
Pvu7g2411 643 Pfam Protein kinase domain 328 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g2411 643 Pfam Legume lectin domain 16 253 IPR001220 GO:0030246
Pvu7g2411 643 Gene3D Phosphorylase Kinase; domain 1 312 403 - -
Pvu7g2411 643 Gene3D Transferase(Phosphotransferase) domain 1 404 599 - -
Pvu7g2411 643 Gene3D - 13 258 - -
Pvu7g2411 643 PANTHER - 278 636 - -
Pvu7g2411 643 PANTHER - 60 254 - -
Pvu7g2411 643 ProSiteProfiles Protein kinase domain profile. 327 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu7g2411 643 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.1 278 636 - -
Pvu7g2411 643 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.1 60 254 - -
Pvu7g2411 643 MobiDBLite consensus disorder prediction 614 643 - -
Pvu7g2411 643 CDD lectin_legume_LecRK_Arcelin_ConA 17 252 IPR001220 GO:0030246
Pvu7g2411 643 SUPERFAMILY Protein kinase-like (PK-like) 311 621 IPR011009 -
Pvu7g2411 643 SMART serkin_6 327 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2411 Pvu-Chr7 47475635 47478472 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2411 20 596 Receptor kinase-like Gene Family AT5G55830 38.365 7.66e-113 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pvu7g2411 Pkinase 4.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2411 - - vun:114190285 1111.67