Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2383 ATGCTACAAACACTGCACCCAAACACATGCAACAAACATTCAGTGTCACAGAAATTGGAAGAACAAACTTGGAAGCCTTATTGCATGTATTGGGGAGAAGTTTTGGGTGGCCATATGGGTAGGGGTGTGATGGAGGAGGAGGTATGGAGGAAGGGACCTTGGACTGCTGAAGAAGACAGATTGCTTGTTGAGTATGTCAGATTGCATGGTGAAGGAAGATGGAACTCTGTTTCTAGGCTTGCAGGATTGAAAAGAAATGGGAAGAGCTGCAGATTGAGGTGGGTGAATTATCTGAGGCCTGACCTCAAGAGGGGACAGATAACACCACAAGAAGAGAGCATAATTGTAGAGTTGCATGCTAGATGGGGAAACAGGTGGTCAACAATTGCAAGGAGTTTGCCAGGGAGAACTGACAATGAGATAAAAAACTATTGGAGGACTCATTTCAAGAAAAAGGCAAAAAGTCCCTCTGATGCAGCCGAGAAGGCAAGAAATAGACTCCTGAGGAAGCAGCAATTTCAGCAGCAACAACAGCAGCAGTTGCAGCAGCAGCAGTATCAGGCACAACAACAACTACAGTTCAACTTTGACATGAAAGGCATCATGGCCTTGCTTGAGGACAACACACATAGAGCACCTTATATATCTCAATCTAGAGAAGAAATGGTAAACATGCAGCAAAACAGCACAGAGGAGCAAGGGTTCTTGTACTCCATGCTCAATGGCCACCCTTCTGCACCCGAGACCTCAGCTGAAGAAAGTTTGTGGGGTGATGGTCTGTGGAACTTGGATCATGGCAATTTCACTGTAGCTAGTGCAGCAAGCAAAGTTGGTCTATACAATTTAGTTGCTCCCTTTTGTTAA 864 0.4514 MLQTLHPNTCNKHSVSQKLEEQTWKPYCMYWGEVLGGHMGRGVMEEEVWRKGPWTAEEDRLLVEYVRLHGEGRWNSVSRLAGLKRNGKSCRLRWVNYLRPDLKRGQITPQEESIIVELHARWGNRWSTIARSLPGRTDNEIKNYWRTHFKKKAKSPSDAAEKARNRLLRKQQFQQQQQQQLQQQQYQAQQQLQFNFDMKGIMALLEDNTHRAPYISQSREEMVNMQQNSTEEQGFLYSMLNGHPSAPETSAEESLWGDGLWNLDHGNFTVASAASKVGLYNLVAPFC* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2383 287 ProSiteProfiles Myb-like domain profile. 99 149 IPR001005 -
Pvu7g2383 287 ProSiteProfiles Myb-like domain profile. 50 98 IPR001005 -
Pvu7g2383 287 Gene3D - 108 152 - -
Pvu7g2383 287 PANTHER MYB TRANSCRIPTION FACTOR 32 266 - -
Pvu7g2383 287 CDD SANT 108 149 IPR001005 -
Pvu7g2383 287 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 99 153 IPR017930 -
Pvu7g2383 287 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 32 266 IPR044676 GO:0003700|GO:0006355|GO:0043565
Pvu7g2383 287 SUPERFAMILY Homeodomain-like 50 145 IPR009057 -
Pvu7g2383 287 Coils Coil 164 184 - -
Pvu7g2383 287 CDD SANT 53 98 IPR001005 -
Pvu7g2383 287 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 50 98 IPR017930 -
Pvu7g2383 287 SMART sant 50 100 IPR001005 -
Pvu7g2383 287 SMART sant 103 151 IPR001005 -
Pvu7g2383 287 Pfam Myb-like DNA-binding domain 51 98 IPR001005 -
Pvu7g2383 287 Pfam Myb-like DNA-binding domain 104 148 IPR001005 -
Pvu7g2383 287 Gene3D - 51 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2383 Pvu-Chr7 47146783 47148189 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2383 44 287 MYB Transcription Factor Family AT4G13480 57.303 3.10e-88 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pvu7g2383 Myb_DNA-binding 2.7e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2383 K09422 - gmx:100795981 442.965