Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2381 ATGGCTGCTACTGCTGCAGGCATAGCTTCATTGTTTTCTTCTTCCATTAACAGTGTCAAATGTCTTCGTTCCAAGCACTGCTCCATGATGGATCCCCTTATGACAGCAATGCTGTCAAACCGTATCTTTGCACCTGTGTCACACTTGGTGGTGGAACCTTTGTCCATCGGAGGTACCACATCGCATAGGTTGTGGGGGCCTAGAATTTCTGCTGCTGTTGCACAAGAAGAGGTGGTTGTTGTGGATGATGCTGGTTTGGTTGAAGAAGAGAAAGTGGAGGAGAATGAAGGGGAGGAAGTGGTGGCAGAACAAGACTCAGATGAATCCTTTGCTAGCACCAAGCTTTATTTTGGGAATTTGCCTTATAGTGTTGATAGTGCCAAACTTGCAGGGCTAATTCAGGACTATGGTAGTGCAGAACTAATTGAGGTTCTTTACGACAGGGACACTGGAAAAAGTAGAGGCTTTGCATTTGTGACAATGAGTTGCATTGAAGACTGTAATGCAGTAATAGAAAATCTTGACGGAAAAGAATACCTGGGCAGAACCTTGAGGGTGAACTTCTCTAACAAACCAAAAGCAAAAGAACCCTTGTACCCTGAAACTGAACATAAGCTCTTTGTTGGGAATCTGTCATGGTCAGTAACTAATGAGATTTTGACACAAGCCTTTCAAGAATATGGAACAGTGGTTGGAGCTAGGGTCCTATATGATGGAGAAACTGGAAGGTCACGTGGCTATGGCTTTGTTTGCTTTTCAACAAAAGAAGAGATGGAAGCTGCCCTTGGAGCCTTGAATGATGTGGAACTAGAAGGACGGGCTATGCGTGTGAGTTTGGCTGAAGGAAAACGTGCACAAGGCTAA 864 0.4456 MAATAAGIASLFSSSINSVKCLRSKHCSMMDPLMTAMLSNRIFAPVSHLVVEPLSIGGTTSHRLWGPRISAAVAQEEVVVVDDAGLVEEEKVEENEGEEVVAEQDSDESFASTKLYFGNLPYSVDSAKLAGLIQDYGSAELIEVLYDRDTGKSRGFAFVTMSCIEDCNAVIENLDGKEYLGRTLRVNFSNKPKAKEPLYPETEHKLFVGNLSWSVTNEILTQAFQEYGTVVGARVLYDGETGRSRGYGFVCFSTKEEMEAALGALNDVELEGRAMRVSLAEGKRAQG* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2381 287 Gene3D - 74 195 IPR012677 -
Pvu7g2381 287 Gene3D - 196 287 IPR012677 -
Pvu7g2381 287 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 204 282 IPR000504 GO:0003723
Pvu7g2381 287 PANTHER 31 KDA RIBONUCLEOPROTEIN, CHLOROPLASTIC 88 284 - -
Pvu7g2381 287 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 113 191 IPR000504 GO:0003723
Pvu7g2381 287 SUPERFAMILY RNA-binding domain, RBD 198 284 IPR035979 GO:0003676
Pvu7g2381 287 PANTHER TRANSFORMER-2-RELATED 88 284 - -
Pvu7g2381 287 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 115 185 IPR000504 GO:0003723
Pvu7g2381 287 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 206 275 IPR000504 GO:0003723
Pvu7g2381 287 SUPERFAMILY RNA-binding domain, RBD 107 194 IPR035979 GO:0003676
Pvu7g2381 287 SMART rrm1_1 114 187 IPR000504 GO:0003723
Pvu7g2381 287 SMART rrm1_1 205 278 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2381 Pvu-Chr7 47123651 47126499 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2381 92 283 Eukaryotic Initiation Factors Gene Family AT3G16380 31.754 8.10e-19 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2381 - - gmx:100820203 441.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu1g2039 1 46292355 46295878 Pvu7g2381 7 47123651 47126499 PCT