Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu7g2377 ATGGCGACTCAAATGAGCAAGAAGAGAAAGTTCGTGGCTGATGGAGTGTTTTTCGCGGAACTGAATGAGGTTCTGACGCGGGAGCTGGCGGAGGACGGTTACTCCGGTGTGGAAGTGAGGGTTACACCAATGCGCACCGAAATCATCATCAGAGCTACTAGAACTCAAGCTGTACTCGGTGAGAAGGGAAGGAGAATCAGGGAACTTACCTCGGTGGTTCAGAAGAGGTTCAAGTTTCCAGAGAACGGCGTTGAACTCTACGCCGAGAAAGTCAACAACAGGGGACTTTGCGCTATTGCTCAGGCTGAGTCTCTCCGCTACAAGCTCCTCGGTGGACTTGCCGTACGCAGGGCTTGCTATGGTGTTTTGAGGTTTGTCATGGAGAGTGGTGCTAAAGGATGCGAGGTGATTGTGAGTGGGAAATTGAGAGCCCAGAGGGCAAAATCCATGAAGTTCAAGGATGGCTATATGATTTCTTCTGGGCAACCTGTCAAGGATTATATTGACTCTGCAGTCAGACACGTTCTCCTCAGACAGGGTGTTCTTGGCATTAAGGTGAAGATTATGCTTGATTGGGATCCTAAAGGGAAGCAGGGTCCTAAAACTCCCCTCCCTGATATTGTCACAATCCATCCTCCAAAAGAGGAAGAGGAATACATCCGGCCAGCTCCAGTTTTGGCCACTGATATTGAGGTCCCTGTTGCTTGA 708 0.4972 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLGEKGRRIRELTSVVQKRFKFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPKTPLPDIVTIHPPKEEEEYIRPAPVLATDIEVPVA* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu7g2377 235 CDD 40S_S3_KH 15 95 - -
Pvu7g2377 235 Pfam Ribosomal protein S3, C-terminal domain 106 188 IPR001351 GO:0003735|GO:0006412
Pvu7g2377 235 PANTHER 30S/40S RIBOSOMAL PROTEIN S3 3 232 - -
Pvu7g2377 235 Gene3D - 1 91 IPR015946 -
Pvu7g2377 235 SUPERFAMILY Prokaryotic type KH domain (KH-domain type II) 10 99 IPR009019 GO:0003723
Pvu7g2377 235 PANTHER 40S RIBOSOMAL PROTEIN S3-RELATED 3 232 - -
Pvu7g2377 235 TIGRFAM uS3_euk_arch: ribosomal protein uS3 8 210 IPR005703 GO:0003735|GO:0006412|GO:0015935
Pvu7g2377 235 ProSitePatterns Ribosomal protein S3 signature. 147 183 IPR018280 -
Pvu7g2377 235 ProSiteProfiles Type-2 KH domain profile. 21 92 IPR004044 GO:0003723
Pvu7g2377 235 Gene3D - 93 219 IPR036419 -
Pvu7g2377 235 SUPERFAMILY Ribosomal protein S3 C-terminal domain 93 191 IPR036419 -
Pvu7g2377 235 Pfam KH domain 20 93 IPR004044 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu7g2377 Pvu-Chr7 47101309 47103510 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu7g2377 1 235 Cytoplasmic Ribosomal Protein Gene Family AT5G35530 87.234 1.34e-151 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu7g2377 K02985 - gmx:100795581 449.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu7g2377 7 47101309 47103510 Pvu7g2377 7 47101309 47103510 ECH